Streptomyces poriferorum: P8A21_29945
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Entry
P8A21_29945 CDS
T10937
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spof Streptomyces poriferorum
Pathway
spof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A21_29945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spof03019
]
P8A21_29945
03400 DNA repair and recombination proteins [BR:
spof03400
]
P8A21_29945
Enzymes [BR:
spof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8A21_29945
Messenger RNA biogenesis [BR:
spof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8A21_29945
DNA repair and recombination proteins [BR:
spof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8A21_29945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
WLQ51446
LinkDB
All DBs
Position
complement(6859330..6861501)
Genome browser
AA seq
723 aa
AA seq
DB search
MTNADRAELRASADSVLARLVGDASGTARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATSLLRAQGSGPTVIVSPLLALMRNQVAAAARAGISARTINSSNTEEWDTVQAEVA
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPAGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLQLPNAAH
RLAWLGDHLKELPGSGIIYTLTVAAAEEITTYLRQCGHTVASYTGRTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASVAFPPEEQVRRTIDALAQAGRPLSLPALEPLVDLRRTRLETMLKVLDVDG
AVRRVKGGWIATGEPWVYDAERYAWVARQRAAEQQAMRDYATTDGCRMEFLRRQLDDEEA
TACGRCDNCAGARFDEAVSTTALDTARGELGRPGVEVEPRKMWPTGLAAVGVDLKGRIPA
GELSGTGRALGRLSDIGWGNRLRPLLAAQSPDAPVPDDVAEAVVTVLADWARGPGGWAPG
AVNAVPRPVGVVTVASHSRPRLIESLGNRIAEVGRMPLLGSVGHAPGAEGARISQTNSAQ
RVRALHERLVVGPELAEALAAVEGPVLLVDDRSDTGWTLAVAARLLRRAGAGAVFPLVLA
VQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcagaccgtgcagagctcagggcttcggccgattccgtactggcacgactc
gtcggggacgcctccggcactgcccggctgcgtgaggaccagtggcgggccatcgaagcg
ctcgtcgccgacaagcgcagagcactggtcgtccagcggaccggctggggaaagtcggcc
gtgtacttcgtcgcgacctcgctgctgcgcgcgcagggcagcgggcccaccgtgatcgtc
tccccgttgctggcgctgatgcgcaaccaggtggcggccgctgcccgggccgggatcagc
gcgcggacgatcaattcgtccaacaccgaggagtgggacaccgtgcaggccgaggtggcc
gccggtgaagtggatgtgctgctcgtcagccccgagcggctcaacaatccggacttccgg
gatcaggtcctgcccaggctggccgccgcgaccggactgctcgtggtcgacgaggcgcac
tgcatctccgactggggccacgacttccgtcccgactaccggcggcttcggaccatgctc
gccgatctgcccgcaggcgtgcccgtcctcgcgaccaccgccaccgcgaacgcccgtgtg
accgcggacgtcgcggaacagctgggcaccggcgcggggacggacgccctcgtcctgcgt
ggcccgctggaccgggagagcctgagcctcggtgtgctgcaactgcccaatgccgcgcac
cggctggcatggctcggcgaccacctcaaggagctccccggttcggggatcatctacacc
ctgacggtcgcggcggccgaggagatcaccacgtatctccggcagtgcgggcacacagtc
gcctcgtacaccggccgtaccgagaacgccgaccggcagcaggccgaggacgatctgctg
gccaaccgcgtcaaggccctggtggcgacctccgcgctgggcatggggttcgacaagccc
gacctgggcttcgtcgtccacctgggctcgccctcctcccccatcgcgtactaccagcag
gtcggccgtgcgggccgcggcgtcgaacacgccgaggtgctgttgcttccgggcaaggag
gacgaggcgatctggcagtacttcgcgtcggtcgccttccccccggaggagcaggtccgg
cgcacgatcgacgcgctcgcccaggctgggcgcccgctctcgctgcctgctctggaaccc
ctggtcgacctgcggcgcactcgcctggagaccatgctcaaggtgctcgacgtcgacgga
gcggtccgccgtgtcaagggcggctggatcgccacgggcgagccctgggtctacgacgcc
gagcgctatgcctgggtggcgcgccaacgggcggccgagcagcaggcgatgcgcgattac
gcgacgacggacggctgccggatggagttcctgcgccgccagttggacgacgaggaggcc
acggcctgcggacgttgtgacaactgcgccggagcccgcttcgacgaggccgtctccacg
accgccctggacaccgctcggggtgagctcggccggcccggcgtcgaggtggagccccgc
aagatgtggccgaccggtctcgccgcggtgggggtggacctcaagggacggatcccggcc
ggcgagttgtccggcaccggccgggcgctgggccgcctctccgacatcggctggggcaac
aggctccgccccctgctggccgcgcagtcgcccgatgccccggtgccggacgacgtggcc
gaagccgtggtgaccgtgctggccgactgggcgcggggcccgggcggctgggcgcccggc
gcggtgaacgccgtcccccggccggtcggcgtcgtcaccgtcgcctcccacagcaggccc
cggctcatcgagtcgctcggcaaccgcatcgccgaggtcggacggatgcctctgctgggc
agtgtcggccatgccccgggagccgaaggtgcccggatctcgcagaccaacagcgcccag
cgggtccgggcactgcacgagcggctcgtcgtgggacccgagcttgccgaggcactggca
gcggtggaaggccccgtcctgctcgtggacgatcgctcggacaccggctggaccctcgcc
gtggcggcccggcttctgcggcgggccggggcgggcgccgtgtttccgctggtcctcgct
gttcaggcgtga
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