Streptomyces poriferorum: P8A21_36450
Help
Entry
P8A21_36450 CDS
T10937
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spof Streptomyces poriferorum
Pathway
spof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P8A21_36450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spof03400
]
P8A21_36450
Enzymes [BR:
spof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P8A21_36450
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P8A21_36450
DNA repair and recombination proteins [BR:
spof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P8A21_36450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
TniQ
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
WLQ52645
LinkDB
All DBs
Position
8374045..8374905
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEALRVFLDDHLVGREIDRVLPLAISVLKTYDPPLAALHGGTVTGVRRHGKFLD
IAVGPLHLVTHLARAGWLHWKDGFPATPPRPGKGPLALRTVLTGGDGFDLTEAGTTKRLA
VYLVNDPAAIPGVARLGPDPLDAAFDRDAFAALLEGERRQIKGALRDQSLIAGIGNAYSD
EILHVARMSPFKLTAHLTDEEITRLHTALRTTLNDAVARSSGLAAGRLKAEKKSGMRVHG
RTGQACPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSKLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaagtcgaagccctgcgggtcttcctcgacgaccacctggtcggc
agggagatcgaccgtgtcctgccgctcgccatcagcgtcctcaagacgtacgacccaccc
cttgccgccctgcacggcggtacggtcaccggcgtccggcggcacggcaagttcctcgac
atcgccgtcggacctctgcacctggtcacccacctcgcccgggccggctggctgcactgg
aaggacggatttcccgccaccccgccgcgcccggggaagggccccctggcgttgcgtacc
gtcctcaccggcggcgacggcttcgacctgaccgaggccgggaccaccaaacgcctcgcc
gtgtacctggtgaacgatccggccgccatccccggggttgcccgcctcggccccgacccg
ctcgacgcggccttcgaccgggacgcgttcgccgcgctgctcgaaggcgaacgccgccag
atcaagggcgccctgcgcgaccagtccctcatcgccggtatcggcaacgcctacagcgac
gagatcctgcacgtcgccaggatgtcgccgttcaaactcaccgcgcacctcaccgacgag
gagatcacccggctccatacggctctgcgcaccaccctgaacgacgccgtcgcccgctcc
agcggactggcggccgggcgcctcaaggccgagaagaagagcggcatgcgcgtccacggg
cgtaccggtcaggcctgcccggtctgtggggacaccatccgtgaggtgtccttcagcgac
tcctcgctccagtactgcccgacctgccagaccggtggcaagccgctggccgaccggcgg
ctctccaagctgctcaagtag
DBGET
integrated database retrieval system
