Sphingopyxis sp. OPL5: EEB18_000665
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Entry
EEB18_000665 CDS
T10726
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03030
DNA replication
spog03430
Mismatch repair
spog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EEB18_000665
03430 Mismatch repair
EEB18_000665
03440 Homologous recombination
EEB18_000665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spog03032
]
EEB18_000665
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_000665
Enzymes [BR:
spog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EEB18_000665
DNA replication proteins [BR:
spog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EEB18_000665
DNA repair and recombination proteins [BR:
spog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EEB18_000665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_14
AAA_24
AAA_19
PIF1
Glyco_tranf_2_5
AAA_2
AAA_18
DUF815
AAA_assoc_2
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
QNO27547
LinkDB
All DBs
Position
complement(144206..145918)
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AA seq
570 aa
AA seq
DB search
MSDSADDEPPMLGMDLPTTAAPASSGPYRVLARKYRPQTFAELIGQDAMVRTLGNAIARD
RLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGICEPCRAITEGRHIDV
IEMDAASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPPHV
KFLFATTEVNKVPVTVLSRCQRFDLRRITPDMLFSHFSSILQKEGVEAEAPAIWLIANAA
EGSVRDGLSILDQAIAHADLDGGGMIGAAQVRVMLGLSDRSSIANLMATILEGDAGGAID
LARGQYALGIEPVAMVRGLMDLTHAITLAKVSRHDDPALAEADRERIGDWAQKLGFAPLN
RLWQLLLKGHDEVLRANNPLEHLEMLLLRVIYAAAMPDPGELAKLLETGHFPATPLPALA
APAQDATAQAPEPVAAETVPPAETPASALTVAQIHQLLESTGNHRLAVDVHDHLRIITLE
PGAIVFVPVAALDGGFARDLGDALLSATGSRWQVRTGEGEGRPSLGQVRAATLADNDQRI
RELPVVKAALAAFPDARLVEGDETRHRSAP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccgccgacgacgaaccaccgatgctgggcatggatttgccgaccaccgcg
gcgcccgcttcgagcggcccctaccgcgtcctcgcgcgcaaatatcgcccgcaaaccttt
gccgaactgatcggtcaggacgcgatggtgcgcacgctcggcaatgcgatcgcgcgcgac
cggctggcgcacgccttcctgatgaccggggtgcgcggggtcggcaagacctcgaccgcg
cggctgatcgccaaggcgctgaactgcatcggcccggacgggcagggcgggccgacgatc
gacccctgcggcatctgcgaaccatgccgcgcgatcaccgaggggcgccatatcgacgtg
atcgagatggacgccgcgtcgaacaccggcgtcgacgacgtgcgcgagatcatcgaggcg
gtgcgctacgccgcggtgtcggcgcgctacaagatctacatcatcgacgaagtgcacatg
ctgtcgcgcaacgcgttcaacgcgctgctgaaaacgctcgaagaaccgccgccacacgtc
aaattcctgttcgcgacgaccgaagtcaacaaggtgccggtgacggtgctgtcgcgctgc
cagcgcttcgacctccgccgcatcacccccgacatgctgttcagccatttcagctcgatc
ctccagaaagaaggcgtcgaggccgaagcgcccgcgatctggctgatcgccaacgccgct
gaaggctcggtgcgcgacggtctgtcgatcctcgaccaggcgatcgcgcacgccgatctg
gatgggggcgggatgatcggcgcggcgcaggtgcgggtcatgctcggcctgtcggaccgc
tcgtcgatcgcgaatttgatggcgacgatcctcgagggcgatgccggcggggcgatcgac
ctggcgcgcggccaatatgcgctgggcatcgaacccgtcgcgatggtgcgcgggctgatg
gacctgacccacgcgatcacgctggccaaggtgtcgcgccatgacgatcccgcgctcgcc
gaggctgaccgcgaacggatcggcgactgggcgcagaaacttggcttcgcgccgctcaac
cggctgtggcaattgctgctcaagggccatgacgaggtgctgcgcgccaacaatccgctc
gagcatctggaaatgctgctgctgcgggtgatctatgctgccgcgatgcccgatccgggc
gagctcgcgaagctgctcgaaaccggccatttccccgcgacgccgctgcccgcgctcgcc
gcgccggcgcaggatgcgaccgcgcaggcgcccgaaccggtcgccgctgaaaccgtgccg
cccgccgagacacccgcttcggcgctcaccgtggcgcaaatccaccaattgctcgaaagc
accggcaatcatcgcctcgcggtcgacgtgcacgatcatctgcggatcatcaccctcgaa
cccggcgcgatcgtctttgtccccgtcgcagcgctcgacggcggcttcgcgcgcgacctt
ggcgacgccttgctttcggccaccggcagccgctggcaggtgcggaccggcgagggcgag
gggcggccgagcctggggcaggtgcgcgccgcgacgctcgccgacaacgaccagcgcatc
cgcgaactgcccgtcgtcaaggccgcattggcggcttttcccgacgcgaggcttgtcgag
ggcgacgagacgcggcataggtccgctccatga
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