Sphingopyxis sp. OPL5: EEB18_001300
Help
Entry
EEB18_001300 CDS
T10726
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spog Sphingopyxis sp. OPL5
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spog03032
]
EEB18_001300
03036 Chromosome and associated proteins [BR:
spog03036
]
EEB18_001300
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_001300
DNA replication proteins [BR:
spog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EEB18_001300
Chromosome and associated proteins [BR:
spog03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EEB18_001300
DNA repair and recombination proteins [BR:
spog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EEB18_001300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QNO27660
LinkDB
All DBs
Position
279462..279740
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENNDLRLEEVEKIVDVFFDSIVDQLASGGRVELRGFGAFSTRGRESRT
GRNPRTGAAVDVQAKSVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggttcaaaagatcgctagcgaaaacaacgatctgcgcctcgaa
gaggtggagaagatcgtcgatgtgtttttcgattccatcgtggaccagctcgcctcgggc
ggccgtgtcgaattgcgcggcttcggcgccttttcgacccgcggtcgcgagtcgcgcacc
ggccgaaatccgcgcaccggcgcggcggtcgatgtgcaggccaaaagcgtgccttatttc
aagcccggcaaggaaatgcgcgagcggctcaacgactga
DBGET
integrated database retrieval system
