Sphingopyxis sp. OPL5: EEB18_001955
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Entry
EEB18_001955 CDS
T10726
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EEB18_001955 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_001955 (xth)
Enzymes [BR:
spog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EEB18_001955 (xth)
DNA repair and recombination proteins [BR:
spog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EEB18_001955 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QNO27774
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All DBs
Position
408780..409583
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AA seq
267 aa
AA seq
DB search
MKIATYNVNGIAGRLDILLGWLAQAEPDIVCLQELKAPQEKFPEKAIRDAGYDVIWHGQS
RWNGVAMLSRVGEIHETRRGLPGDPGDEQSRYIEAAVGGILVAGLYLPNGNPWPGPKFDY
KMQWMARLDAHLTTLFDLDAPVVICGDFNVIPTDLDVYKPENWKKDALFAPEAKAAYRRI
LDQGWTDAIRHLHPDERIYSFWAYWRRSFERNAGIRIDHLLLNKPAAKRLEAAGVDTRPR
ALDKTSDHAPAWIELGAGSTKRKRKAS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcgacctataatgtgaacggcatcgccggccgcctcgacattctgctcggc
tggctcgcgcaggccgagcccgacatcgtttgcctgcaggaattgaaagcccctcaggag
aaattccccgagaaggcgatccgcgacgcgggctatgacgtgatctggcacggccagagc
cgctggaacggcgtcgcgatgctgagccgcgtcggcgaaatccacgaaacgcgccgcggc
ctccccggcgatcccggcgacgagcagagccgctacatcgaagcggcggtcggcggcatc
ctcgtcgccggcctctatcttccgaacggcaatccctggccgggtccgaagttcgattac
aagatgcagtggatggcgcgtctcgacgcgcatctgacaacgctcttcgatctcgacgcc
cccgtcgtcatttgcggcgacttcaacgtcattcccaccgacctcgatgtgtacaaaccc
gagaattggaagaaggacgcgctcttcgcgcccgaagccaaagccgcctatcgccgcatc
ctcgaccagggctggaccgatgcgatccgccacctgcatcccgatgagcgcatctacagc
ttctgggcctattggcggcgctcgttcgaacgcaatgccggcatccgcatcgaccatctg
ctgctgaacaagcccgcggcgaagcggctcgaggcagccggcgtcgacacccgcccgcgg
gcgctcgacaagacgagcgaccatgcgcccgcctggatcgaacttggcgcgggctccaca
aagcgaaagcgcaaggcgtcatga
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