Sphingopyxis sp. OPL5: EEB18_004790
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Entry
EEB18_004790 CDS
T10726
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EEB18_004790 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spog01007
]
EEB18_004790 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spog03016
]
EEB18_004790 (thrS)
Enzymes [BR:
spog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
EEB18_004790 (thrS)
Amino acid related enzymes [BR:
spog01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
EEB18_004790 (thrS)
Transfer RNA biogenesis [BR:
spog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EEB18_004790 (thrS)
Prokaryotic type
EEB18_004790 (thrS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
QNO28274
LinkDB
All DBs
Position
complement(979839..981842)
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AA seq
667 aa
AA seq
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MSQMIRVTLPDGSAREVARGTTPAQIAADIGPGLAKAALAAKIDGELRDIMRPLEEDTNL
SLVTSRDEADALELFRHDFAHVLAEAVQNLFPGTQITFGPSTGDGFYYDFAPTAEHGPFR
DDELPLIEEEMRKIIAADLPLTREVWERDKLIAKWAAEGETFKAEWAHELPEGEELTVYR
SGDGWMDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAQLSRIYGTGWLNKKQLAE
HLVRLEEAAKRDHRKIGREMDLFHLQEEAHGSVFWHPKGYRIYRELEAYMRRAIDGSGYQ
EVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNIEDDGPIVSDDAEWMALKPMNCPAH
VLIFRQGMKSYRDLPLRMAEMGCCHRNEPHGALHGIMRVRQFTQDDGHIFCREDQIVDEV
RDFCALLDRVYKQLGFEKYAVKLALRPDMRFGTEEMWDKAEAELREAVERAGMATEEYGW
EELPGEGAFYAPKLEFHLTDAIGRTWQCGTIQSDRVMPERLDASYIGEDGERHRPVMLHR
AILGTYERFIGILIEHFAGRFPTWLAPVQAVVATIVSDADAYAKDAVAQLVAAGIRAESD
VRNEKINYKVREHSLAKVPYLLVVGNREAEEGTVAIRTLGQDGQRIMPLAEAIAMLKGEA
TPPDLRG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagatgatccgcgtcacccttcccgatggctctgcccgtgaagtcgcgcgcggg
actaccccggcccagatcgccgccgacatcggacccggcctcgccaaggccgcgctcgcc
gcgaagatcgacggcgagctgcgcgacatcatgcgcccgctggaggaagacaccaacttg
tcgctggtcaccagccgcgacgaggccgacgcgctcgaactctttcgccacgactttgcg
catgtcctcgccgaagcggtgcagaacctgtttccgggcacgcagatcaccttcggcccg
tcgacgggcgacggcttctactacgacttcgccccgaccgccgagcatggtccgttccgc
gacgacgaactgccgctgatcgaggaggagatgcgcaagatcatcgccgccgacctgccg
ctgacgcgcgaggtgtgggagcgtgacaagctgatcgccaaatgggcggccgagggcgag
acgtttaaggccgaatgggcgcacgaactgcccgagggcgaggaacttaccgtctaccgc
agcggcgacggctggatggacatgtgccgcggcccgcacctggcctcgacgggcaagctc
gaccccgccgcgttcaagctgacgcgcgtctcgggcgcctattggcgcggcgaccagaag
aatgcgcagctcagccgcatctacggcaccggctggctcaacaagaagcagctggccgag
catctcgtccggctcgaggaggccgcgaagcgcgaccatcgcaagattggccgcgaaatg
gacctgttccacctgcaggaggaagcgcacggcagcgtcttctggcaccccaagggctat
cgcatctaccgcgagctcgaagcctatatgcgccgcgcgatcgacggctcgggctatcag
gaggtcaagactccgcaggtgatggacgcgcgccagtgggagcaatcgggccactggggc
aaatatcgcgaaaatatgttcgtcatccccgacgaggtcccgaacatcgaggatgacggc
ccgatcgtctccgacgatgccgagtggatggcattgaagccgatgaactgccccgcgcac
gtcctgatcttccgtcagggcatgaagtcgtatcgcgacctgccgctgcgcatggccgaa
atgggctgttgccaccgcaacgaaccgcatggcgcgctgcacggcatcatgcgtgtgcgc
cagttcacgcaggacgacggtcatatcttctgccgcgaagaccagatcgtcgatgaagtg
cgcgatttctgcgcgctgctcgaccgcgtctacaagcagctcgggttcgaaaaatatgcg
gtgaagctcgcgctgcgccccgacatgcgcttcggcaccgaagaaatgtgggacaaggcc
gaggccgagcttcgcgaagccgtcgagcgcgccggcatggcgaccgaggaatatggctgg
gaagaactgccgggcgagggcgccttctatgcgcccaagctcgaattccacctgaccgac
gcgatcggccgcacctggcagtgcgggacgatccagtccgaccgcgtgatgcccgaacgt
ctcgatgcgagctatatcggcgaggatggcgagcgccatcgcccggtgatgctccaccgc
gcgatccttggcacttacgagcgcttcatcggcatcctcatcgagcatttcgccggccgc
ttcccgacctggctcgcgccggtgcaggctgtcgtcgcgacgatcgtcagcgacgccgac
gcttatgccaaggacgcggtggcccagctcgtcgcggcgggcattcgcgccgaaagcgac
gtccgcaacgagaagatcaactacaaggtccgcgaacacagcctcgccaaggttccctac
ctgctggtggtcggcaatcgcgaggccgaggaaggcacggttgcgatccgcaccctcggt
caggacggccagcgcatcatgccgctcgccgaggcgatcgcgatgctcaagggcgaggcg
accccgcccgacctgcgcggttga
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