Sphingopyxis sp. OPL5: EEB18_005630
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Entry
EEB18_005630 CDS
T10726
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00260
Glycine, serine and threonine metabolism
spog00270
Cysteine and methionine metabolism
spog00680
Methane metabolism
spog01100
Metabolic pathways
spog01110
Biosynthesis of secondary metabolites
spog01120
Microbial metabolism in diverse environments
spog01200
Carbon metabolism
spog01230
Biosynthesis of amino acids
Module
spog_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
EEB18_005630
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EEB18_005630
00270 Cysteine and methionine metabolism
EEB18_005630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spog04147
]
EEB18_005630
Enzymes [BR:
spog01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
EEB18_005630
1.1.1.399 2-oxoglutarate reductase
EEB18_005630
Exosome [BR:
spog04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EEB18_005630
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Gene cluster
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Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
NAD_binding_2
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QNO28434
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Position
1163949..1165535
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AA seq
528 aa
AA seq
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MTAPKVLISDKMDPKAAAIFKERGIDVDVITGKTKDELIAMIGDYDGLAIRSATKVTADV
LAAATNLKVVGRAGIGVDNVDIPEASKKGVIVMNTPFGNSITTAEHAIAMMFALARQIPE
ANAGTQAGKWPKNDFMGVELTSKTLGLIGCGNIGSIVAERALGLRMKVVAFDPFLTPERA
IELGVEKADLDTLLAKADFITLHTPLTDQTRNILSADNIAKAKKGVRIINCARGGLIDEA
ALKDALDSGHVAGAALDVFQTEPPAADHPLFGAPNFICTPHLGASTDEAQVNVAIQVAEQ
LSDYLLTGGITNALNVPSLSAEEAPKLRPYMSLAEKLGSLVGQLAHDNLTTISVEVEGAA
AELNLKPITAAVLTGLMRRYSDSVNMVNAPHLARERGLDVREVRHDRDGDYHTLVRVTVA
TSDGDRSVAGTLFSNGDPRLVEMFGIKVEADLDGHMLYIVNEDAPGFIGRIGTALGEAGL
NIGTFHLGRRAAGGEAVLLLSLDSPMPEPLLWQLCQLPGVKTVKGLKF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccaaagttctcatttccgacaaaatggacccgaaagccgccgcgattttc
aaggaacgtggcatcgacgtcgatgtcatcaccgggaagaccaaggacgagctgatcgcg
atgatcggcgactatgacggcctcgcgatccgctcggccaccaaggtcaccgccgacgtc
ctcgccgccgcgacgaacctgaaggtcgtcggccgcgccggcatcggcgtcgacaatgtc
gacattcccgaggcgtcgaaaaagggcgtcatcgtaatgaacacgccctttggcaacagc
atcaccaccgccgaacatgcgatcgcgatgatgttcgccctcgcacgccagattcccgaa
gccaacgccgggacccaagcgggcaaatggccgaagaacgatttcatgggcgtcgagctg
acctcgaagacgctcggcctgatcggctgcggcaatatcggcagcatcgtcgccgaacgt
gccctcggcctgcgcatgaaggtcgtcgctttcgatcccttcctgacccccgagcgcgcg
atcgaactcggcgtcgaaaaggccgatctcgacaccctgctcgccaaggccgatttcatc
acgctgcacacgccgctgaccgaccagacgcgcaacatattgtcggccgataatatcgcc
aaggcgaagaagggggtgcggatcatcaactgcgcgcgcggcgggttgatcgatgaggcg
gcgctcaaggacgcgctcgacagcggccatgtcgcgggcgccgcgctcgacgtgttccag
accgagccgccggcggccgatcatccgctgttcggcgccccgaacttcatctgcaccccg
cacctcggcgcgtcgaccgacgaggcgcaggtcaatgtcgcgatccaggtggccgagcag
ctgtcggactatctgctcaccggcggcatcaccaacgcgctcaacgtgccgagcctctcg
gccgaagaagcgccgaagctgcgcccctatatgagcctcgccgaaaagctcggcagcctc
gtcggccagctcgcgcacgacaatctcacgacgatctcggtcgaggtcgagggtgccgcc
gccgagctgaacctcaagccgatcaccgccgcggtgctcaccggcctgatgcgtcgctat
tcggacagcgtgaacatggtcaacgcgccgcatctcgcccgcgaacgcggcctcgatgtg
cgcgaagtgcgtcatgatcgcgacggcgactatcacacgctcgtccgcgtcacggtggcg
accagcgacggcgaccgctcggttgccggcaccttgttcagcaacggcgacccgcgcctg
gtcgaaatgttcggcatcaaggtcgaggccgatctcgacggccacatgctctacatcgtc
aacgaggatgcccccggcttcatcggccgcatcggcaccgcactcggcgaagccgggctc
aacatcggcaccttccacctcggccgccgcgccgccgggggcgaagcggtgctgctgctc
agcctcgactcgccgatgcccgaacccctgctgtggcagctgtgccagctgcccggcgtg
aagacggtgaagggtttgaagttctag
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