Sphingopyxis sp. OPL5: EEB18_009145
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Entry
EEB18_009145 CDS
T10726
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00300
Lysine biosynthesis
spog01100
Metabolic pathways
spog01120
Microbial metabolism in diverse environments
spog01230
Biosynthesis of amino acids
Module
spog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EEB18_009145 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spog01002
]
EEB18_009145 (dapE)
Enzymes [BR:
spog01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
EEB18_009145 (dapE)
Peptidases and inhibitors [BR:
spog01002
]
Metallo peptidases
Family M20
EEB18_009145 (dapE)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QNO29076
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All DBs
Position
1905693..1906826
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AA seq
377 aa
AA seq
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MTHSIDPVDLAQALIAVPSVTPATGEVFDVLEAALTPLGFMVERFVDGIEPDGPVENLLA
VREGAGPRHFGFAGHLDVVPPGVGWAGDAFVPDVRGELLYGRGAVDMKGSIAAFVAAAAA
TPASAGTISLIITGDEEGPAIFGTRALMEHMAGRGVTPDMIVVGEPTSVNKLGDMVKIGR
RGSVNIWIDVPGTQGHVAYPHLADNPIPKLVRIMAAIDAVVLDEGNDWFQPSNIEFTDVE
VGNGATNVIPASARARLSIRFNDAHKGAELIAMIERIAQGVEPKAKVLGKVSGEAFLTPP
GDLSGLVAEAIHAETDIVPEMSTTGGTSDARFLHALCPVVEFGLTNATMHKLDEAVAVAD
LHALTAIYRGILMRAFA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacccatagcatcgaccccgtggacctcgcccaggcgctgatcgccgtcccttccgtc
accccggccacgggcgaggtgtttgacgtgctcgaggcggcgctcaccccgctcggtttc
atggtcgagcgcttcgtcgacggaatcgaacccgacgggccggtcgagaacctgctcgcg
gtccgcgaaggcgccgggccgcggcatttcggctttgccgggcatctcgatgtcgtgccg
ccgggcgtcggctgggcgggcgacgcctttgtccccgacgtgcgcggcgagctgctttac
ggccgcggcgcggttgacatgaaggggtcgatcgcggcctttgtcgccgcagccgccgcg
acaccggcgagcgccgggacgatcagcctgatcatcaccggcgacgaggagggccctgcg
atcttcggcacccgcgcgctgatggagcatatggcggggcgcggggtgacgcccgacatg
atcgtcgtcggcgagccgacctcggtcaacaagctgggcgacatggtgaagatcgggcgg
cgcgggtcggtcaatatctggatcgacgtgccggggacgcaggggcatgtcgcttacccg
cacctcgccgacaacccgatccccaagctggtccggatcatggcggcgatcgacgccgtg
gtgctcgacgagggcaatgactggttccagccgtcgaacatcgagttcaccgacgtcgag
gtcggcaatggcgccaccaatgtcatcccggcgtcggcgcgggcgcggctgtcgatccgc
ttcaacgacgcgcacaagggcgccgaactgatcgcgatgatcgagcggatcgcacagggc
gtcgaaccgaaggcgaaggtgctggggaaggtgtcgggcgaggcgttcctgaccccgccg
ggcgatttgtcggggctggtcgccgaagcgatccatgccgagaccgacatcgtgcccgaa
atgtcgacgacggggggcacgtccgacgcgcgcttcctgcacgcgctgtgcccggtggtc
gaattcgggctgaccaatgcgacgatgcataagctcgacgaggcggtcgcggtggcggac
ctgcatgcactcaccgccatctatcgcgggatattgatgcgcgcctttgcctag
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