Sphingopyxis sp. OPL5: EEB18_010085
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Entry
EEB18_010085 CDS
T10726
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EEB18_010085
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spog01007
]
EEB18_010085
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spog03016
]
EEB18_010085
Enzymes [BR:
spog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
EEB18_010085
Amino acid related enzymes [BR:
spog01007
]
Aminoacyl-tRNA synthetase
Class II (U)
EEB18_010085
Transfer RNA biogenesis [BR:
spog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EEB18_010085
Prokaryotic type
EEB18_010085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QNO29243
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All DBs
Position
complement(2127051..2129447)
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AA seq
798 aa
AA seq
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MKITLDWLKVHLETSATVADVVATLNRIGHEVEGIENPAEKLTGFRVARVLTAEKHPQAD
KLQVLTVEAGPDINGGAPLTVVCGAPNARAGLVGVLGLPGAVVPANGMELKVAAVRGVES
NGMMCSTRELELGDDHDGIIELPADAPIGTAFADYSGAGEPVIDISITPNRQDCMGVRGI
ARDLAAAGLGTLKPLEVPVIAGAGAIATPIATNDAEGCPAFYGRTIAGVDNRVATPEWMR
RRLEAVGQRSISALVDITNYAMLDLGRPSHVYDRAQLSGGLTARRAKPGETVTALNGKDY
TLSDTMTVIADDAGVHDIAGIMGGEHSGCSETTTDVLLEIAYFTPERIALTGQALGLTSD
ARSRFERGVDPAFLDDATAIVTGHILAICGGTPSEVTRAGTPPAAEKTVEYDPALSATLG
GIAIEPATQRAILESLGFGVTEGTPWRIAVPSWRRDVDAAPDIVEEVTRITGFDAVESVA
LPRVDGVAKPTATADQLLERRLRRAAAAGGYHEAVTWSFVSDREAAPFGGGAWSLANPIS
EELKVMRPSLLPGLLAAAARNQNRGADSIRLFEIGRRYLADTEHPTLCIVMAGNRSERGW
QAGKAQPFDAYDAKAAALALLDAAGAPTDRLQVMEPVAEAGIWHPGQAATLRLGPKAVLA
EFGALHPSLARHYDVDGAVMAVQIFLDAIPAKRASGPARSAFTPPALQPVRRDFAFLAPD
SLAAGDLVRAVKGADKAVITDARLFDRFAGQGVPEGQVSLAVEVVLQPAEKSFAEAELKA
IADKVVAAAAKLGAVLRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccctcgactggctgaaggtccatctcgaaacctcggcgaccgtcgccgac
gtcgtcgcgacgctcaaccgcatcggccatgaggtcgaaggcatcgagaatccggccgag
aagctgaccggtttccgcgtcgcgcgcgtgctcacggccgaaaaacatccgcaggccgac
aaattgcaggtgctgaccgtcgaggccggccccgacatcaacggcggcgcgccgctgacc
gtcgtgtgcggcgcccccaacgcgcgcgccggcctcgtcggcgtgctcggcctgcccggc
gcggtcgtgcccgcgaacggcatggaattgaaggtcgccgccgtgcgcggggtcgaatcg
aacggcatgatgtgctcgacgcgcgaactcgaactcggcgacgatcatgacgggatcatc
gaattgcccgccgatgcccccatcggcaccgccttcgccgattacagtggcgcgggcgag
ccggtgatcgacatttcgatcacccccaaccggcaggattgcatgggcgtgcgcggcatc
gcgcgcgacctcgccgccgccgggctcggcacgctgaagccgctcgaggttcccgtgatc
gcgggcgcaggcgccatcgcgacgccgatcgcgacgaacgacgcggaaggctgtcccgct
ttctatggccgcaccatcgctggcgtcgacaaccgcgtcgccacccccgaatggatgcgc
cgccgtttggaagcggtcggccagcgctcgatctcggcgctcgtcgacatcaccaactat
gcgatgctcgacctcggccggccgagccatgtctatgaccgcgcgcagctcagcggcggg
ctgaccgcgcgccgcgcgaagccaggcgagaccgtcaccgcgctgaacggcaaggattat
acgctgagcgacacgatgacggtgatcgccgacgacgcgggcgtccacgacatcgcgggc
atcatgggcggcgagcatagcgggtgcagcgagacgacaaccgacgtgctgctggagatc
gcctatttcacccccgagcgcatcgcgctgaccgggcaggcgctcggcctgaccagcgac
gcgcgcagccggttcgagcgcggggtcgaccccgccttcctcgacgatgcgaccgcgatc
gtcaccgggcatatcctcgcgatctgcggcggcaccccgtcggaagtgacgcgcgcgggc
accccgcccgcggccgaaaagacggtcgagtacgaccccgcgctgtcggcgacgctcggc
ggcatcgcgatcgaacccgcgacacagcgcgcgatcctcgaatcgctgggtttcggcgtg
accgaaggcacgccctggcgcatcgcggtgccgagctggcgccgcgacgtcgacgccgcg
cccgacatcgtcgaagaggtcacgcgtatcaccggcttcgacgcggtcgaatcggtcgcg
ctgccgcgtgtcgatggcgtcgccaagccgaccgcgaccgccgaccagttgctcgaacgc
cggctgcgccgcgctgcggcggcgggcggctatcatgaggcggtaacgtggagcttcgtg
tccgaccgcgaggccgcgcccttcggcggcggcgcgtggagcctcgccaatccgatcagc
gaggagctcaaggtcatgcgcccgtcgctgctacccgggctgctcgccgcggcggcgcgc
aaccagaatcgcggcgccgacagtatccggttgttcgagatcgggcgccgctatctggcc
gataccgaacatccgaccctgtgcatcgtgatggcgggtaaccgcagcgagcgcggctgg
caggcgggcaaggcgcagcccttcgacgcctatgacgccaaggccgcggcgctggctttg
ctcgacgccgcgggggcgccgaccgaccggctgcaggtgatggagcccgtcgccgaggcc
ggcatctggcaccccggacaggccgcgaccctgcgcctcggccccaaggcggtgctcgcc
gagttcggcgcgctgcacccgtcgctggcgcggcattatgacgtcgacggcgcggtgatg
gcggtgcaaatcttcctcgacgcgatccccgcgaagcgcgcgagcggcccggcgcgcagc
gccttcaccccgcccgcgctgcagccggtgcgccgcgacttcgccttcctcgcgcccgac
agcctcgcggcgggcgacctcgtccgcgcggtgaagggcgccgacaaggcggtgatcacc
gacgcgcgcctgttcgaccgcttcgccgggcagggcgtgcccgagggtcaggtcagcctg
gcggtcgaagtcgtgttgcaaccagcagagaaaagctttgccgaggccgagctgaaggcg
attgcggataaggtggtggctgcggcagcgaagctcggggcggtgctgcgggggtga
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