Sphingopyxis sp. OPL5: EEB18_011780
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Entry
EEB18_011780 CDS
T10726
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spog Sphingopyxis sp. OPL5
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spog03016
]
EEB18_011780
Enzymes [BR:
spog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EEB18_011780
Transfer RNA biogenesis [BR:
spog03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EEB18_011780
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNO25488
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All DBs
Position
2466852..2467469
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AA seq
205 aa
AA seq
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MTVYFHEEDLPEGVLGPGAVAIDTETMGLNPLRDRLCLVQISDGSGDEHLVRFGPGSAYD
APVLKAILTDANRLKLFHFARFDIAALQQALGVVTAPVYCTKIASRLIRTYTDRHGLKEL
VRELLGQEVSKQQQSSDWGAATLSDAQRDYAASDVRFLHAMKEILDARLVREGRMELAQS
CFDFLPTRAALDLAGWPEADIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctattttcatgaagaggatctgcccgagggcgtgctgggtccgggtgcggtt
gcgatcgataccgagacgatggggctcaacccgctgcgcgaccggctgtgcctggttcag
atcagcgacgggtcgggcgacgagcatctcgtccgcttcggtcccggcagcgcctatgac
gcgccggtgctgaaggcgatactgaccgatgccaaccggttgaaattgttccatttcgcg
cgtttcgacatcgccgcgctgcagcaggcgctcggcgtcgtgaccgcgccggtctattgc
accaagatcgcctcgcggctgatccgcacctacaccgaccgccacgggctgaaggaactg
gtccgcgaattgctgggccaggaggtgtcgaaacagcagcagtcgagcgactggggtgcc
gcaacgctgagcgacgcgcagcgcgactatgccgcgagcgacgtgcgcttcctccacgcg
atgaaggagatcctcgacgcgcggctggtccgcgagggacgcatggaactggcgcaatcc
tgtttcgacttcctgccgacgcgcgcggcgctcgacctcgcgggttggcccgaggccgat
attttcgcgcacagctga
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