Sphingopyxis sp. OPL5: EEB18_012995
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Entry
EEB18_012995 CDS
T10726
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EEB18_012995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_012995
Enzymes [BR:
spog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EEB18_012995
DNA repair and recombination proteins [BR:
spog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EEB18_012995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
PIF1
AAA_16
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QNO25710
LinkDB
All DBs
Position
complement(2717188..2719356)
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AA seq
722 aa
AA seq
DB search
MTRARTLLLTAALGPLDYRVPYGMEAALGSVVVAPLGPRRLGGVIWEDQSFGAPDPVGDN
RLRNLFEVVPVPPVQAPLRKLVEWTSDYYLAPPGSVLRMVLPGVAFADARRPIIEYRATG
ELPKRMTPQRTVALDMIGRSQGTVRELAALAEVSEAVVRGLVNSGALEAVAVSADAPYPA
PDSAFAPPDLSDEQTAAAARLIAAVAAEKFETLLLDGVTGSGKTEVYMEAIAAAIDAGKQ
ALVLLPEIALTEPMLTRFAARFGCEPVGWHSGLRSAERRRAWHAIANGDARIVIGARSAL
FLPYAKLGVIVVDEAHETSFKQEDGVHYHARDVAVMRGHFEGLPVVLASATPALESLAMV
EAGRYRHIQLPARFGGATLPDLAAIDMRQDPPDRGTWLAPPLVDALADRLAKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVRLRFPEARVAIVTSDTLWSPAKAAEFVDNVEGGLVDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRASERTFQQIAQVAGRAGRGVKPGEVLIQTRVPDAP
VMAALVANDRDGFYAAEAAARKHAGAPPYGRFAALVISSEDIEVARGVAQRLGQKAPVAE
GLAVYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGTIREWVGQIDWPSKARLAIDIDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgcccgcaccctgctcctcaccgccgcgctcggcccgctcgattaccgggtg
ccttatggcatggaggccgcgctcggcagcgtcgtcgtcgcgccgctcgggcctcgccga
ctcggcggggtgatctgggaggaccaaagcttcggtgcccccgatccggtcggcgacaac
cggctgcgcaatttattcgaggtggtgccggtaccgccggtgcaggcacccttgcgcaag
ctggtcgaatggacgagcgactattatctcgcgccgccggggtcggtgctgcgcatggtg
ctgcccggggtcgccttcgccgatgcgcggcgcccgatcatcgaatatcgcgcgacgggt
gagctgcccaagcggatgaccccgcagcggacggtcgcgctcgacatgatcggccgctcg
cagggcacggtgcgcgaactcgcggcgctcgccgaggtcagcgaggcggtggtgcgcggg
ctggtgaacagcggcgcgctcgaggcggtcgcggtttcggccgacgcgccttatcccgct
cccgattcggccttcgcgccgcccgacctgtcggacgaacagacagcggcggcggcgcgg
ctgatcgcggcggtggcagccgaaaaattcgagacgctgctgctcgacggggtcaccggg
tcgggcaagaccgaagtctatatggaggcgatcgccgccgcgatcgacgcgggcaagcag
gcgctggtgctactccccgaaatcgcgctgaccgagccgatgttgacccgctttgcggcg
cgcttcggctgcgagccggttgggtggcattcaggcctccgctcggccgagcgccgccgc
gcctggcatgccatcgcgaacggtgacgcgcgcatcgtcatcggcgcgcgctcggcactg
ttcctgccctacgccaagctcggcgtgatcgtcgtcgacgaagcgcatgaaacaagcttc
aagcaggaggatggcgtccattatcacgcgcgcgacgtcgcggtgatgcgcgggcatttc
gaagggctgccggtggtcctcgcgagtgcgaccccggcgctcgaaagcctcgcgatggtc
gaggcggggcgctatcgccatatccagctgcccgcgcgcttcggcggcgcgacgctgccc
gatctcgccgcgatcgacatgcggcaggacccgcccgatcgcggcacctggctcgcgccg
ccgctcgtcgacgcgcttgcggaccggcttgccaagggcgagcagagcctgctgttcctc
aatcgccgcggcttcgcgccgctgaccttgtgccgcacctgcggccaccgcatccagtgc
ccgaactgcaccgcgtggatggtcgagcaccggctcgtccaccgccttgcctgccatcat
tgcggccatgtcatgccgccgccgcgactgtgccccgaatgcgaggatgaggacagcctc
gtcgcctgcggacccggggtcgaacgcgtcgctgacgaggtgcgcctgcgtttccctgag
gcacgcgtcgcgatcgtcaccagcgatacgctctggtcgcccgccaaagccgcagaattc
gtcgacaatgtcgagggcgggctggtcgacatcatcatcggcacccagctcgtcaccaag
ggctatcatttcccgaacctcaccctcgtcggggtggtcgacgccgacctcgggctcgac
ggcggcgacctgcgcgcgtcggagcgcaccttccagcagatcgcgcaggtcgcggggcgc
gccgggcgcggggtgaagcccggcgaggtactgatccagacgcgtgtgcccgacgcgccg
gtgatggcggcgctggtcgcgaacgaccgcgacggtttctatgccgccgaggccgcggcg
cgaaagcacgccggcgccccgccctatggccgcttcgccgcgctggtgatttcgtcggag
gatatcgaagtcgcgcgcggcgtcgcgcagcggctggggcagaaagccccggtcgccgag
ggtcttgccgtctatggccccgcccccgccccgctcgcgatgctgcgcggccgccaccgt
ttccgcctgttgctccacgcgccgcgcagcttcgacctgcaaggcacgatccgcgagtgg
gtcggccagatcgactggccgtcgaaggcgcggctggcgatcgacatcgacccctatagt
ttcgtttga
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