Sphingopyxis sp. OPL5: EEB18_013620
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Entry
EEB18_013620 CDS
T10726
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00061
Fatty acid biosynthesis
spog00071
Fatty acid degradation
spog01100
Metabolic pathways
spog01212
Fatty acid metabolism
spog02024
Quorum sensing
spog04146
Peroxisome
Module
spog_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EEB18_013620
00071 Fatty acid degradation
EEB18_013620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EEB18_013620
09145 Cellular community - prokaryotes
02024 Quorum sensing
EEB18_013620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spog01004
]
EEB18_013620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spog04147
]
EEB18_013620
Enzymes [BR:
spog01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EEB18_013620
Lipid biosynthesis proteins [BR:
spog01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EEB18_013620
Exosome [BR:
spog04147
]
Exosomal proteins
Exosomal proteins of breast milk
EEB18_013620
Exosomal proteins of breast cancer cells
EEB18_013620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QNO25823
LinkDB
All DBs
Position
complement(2842467..2844134)
Genome browser
AA seq
555 aa
AA seq
DB search
MDSGFSWSTNYNHPTPWDQDFPPLSLPDMLAASIAKRRDAPMLDFMGRHFSYNEVAHGVA
RVARGLQERGIGKGTRIGLFLPNVPHYVAAYYGALAAGATVVNFSPLYTATELEAQVEDS
GTEILFTMSATALLPTALKVLDGSSLKQLIVGSVAGGLPGAKSLLYRMLRRKEVSALPDD
SRVTRFSALVANDGHYEPATIDPETDVALIQYTGGTTGTPKGAMLTHQNLTANARQVNSI
DPDHDADDRILGVLPFFHVFANTCVLNRTVLNGGMIAMLPRFDAKQALEAITRTKTTALP
GVPTMYQALLDHPDLAKTDFSSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSG
VVSTNPYAGPVKAGTIGQPLPATHIRLVDKEDPMKDAPAGEPGELVVKGPQIMRGYWNRA
DADGDSFTEDGWLRTGDVAVIDEDGYVRIVDRLKDMIAVGGFKVYPSVIEAHLYEHPAVK
EAIVLGVPDAYRGEAPKAFVTLEDGFDVSGEALAAWLNPQLGKHERVNAVEVRLNLPKTM
IGKLDRKALRAEEGG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatagcggtttttcctggtcgacgaattacaaccaccccacgccctgggaccaggat
ttcccgccgctctcgctccccgacatgctcgccgcaagcatcgcgaagcgccgcgatgcg
ccgatgctcgatttcatgggacgccatttcagctacaacgaggtcgcgcacggggtcgcc
cgcgtcgccaggggcctgcaggaacgcggcatcggcaagggcacgcgcatcggcctcttc
ctccccaacgtcccgcattatgtcgcggcctattatggcgcactcgccgccggggcgacg
gtggtcaatttctcgccgctctacaccgcgactgaactcgaggcgcaggtcgaggattcg
ggtaccgaaatcctctttacgatgagcgcgaccgcgctgctgccgaccgccttgaaggtg
ctcgacggatcgagcctgaaacagttgatcgtcgggtcggtcgctggcggattgcccggc
gccaagtcgctgctctaccggatgctgcgccgcaaggaggtctcggcgctgcccgacgac
agccgcgtcacccgcttctcggcgctggtcgccaatgacggccattacgaacccgcaacg
atcgatcccgaaaccgacgtcgcgctgatccagtacaccggcggcaccaccggcacgccg
aagggcgcgatgctgacccaccagaatctcaccgccaacgcgcggcaggtcaacagcatc
gaccccgatcacgacgccgacgaccgcatcctcggcgtcctccccttcttccatgtcttc
gccaacacctgcgtcctcaaccgcacggtgctcaacggcggcatgatcgcgatgctgccg
cgtttcgatgccaaacaggcgctggaggcgatcacccgcacaaaaacgaccgcgctgccc
ggcgtgccgacgatgtatcaggcgctgctcgaccatcccgacctcgcgaagaccgacttc
tccagcctgcgcgtctgcatttcggggggggcgccgatgcccgccgagctccgcgagaaa
ttcgtcgccgccacgggcgcttcgctggtcgagggctatggcctcaccgaaagttcgggc
gtcgtctcgaccaacccctatgccggcccggtcaaggcggggacgatcggccagccgctg
cccgcgacgcacatccgtctcgtcgacaaggaagaccctatgaaggacgccccggcgggc
gaaccgggggaactggtcgtcaagggcccgcagatcatgcgcggctattggaaccgcgcc
gacgccgatggcgacagcttcaccgaagacggctggctgcgcaccggcgacgtcgcggtg
atcgacgaagacggctatgtccggatcgtcgaccgactgaaggacatgatcgcggtcggc
ggcttcaaggtctaccccagcgtcatcgaggcgcatctctatgaacatcccgcggtcaag
gaagcgatcgtcctcggcgtccccgacgcctatcgcggcgaggcgcccaaggcgttcgtg
acgctcgaggacggcttcgacgtctcgggcgaagcgctcgccgcctggctcaacccgcag
ctcggcaagcatgagcgggtgaacgcggtcgaggtgcggctgaatttgcccaagacgatg
atcgggaagctcgatcgcaaggccttgcgggcggaagagggaggctga
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