Sphingopyxis sp. OPL5: EEB18_013910
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Entry
EEB18_013910 CDS
T10726
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spog Sphingopyxis sp. OPL5
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spog03016
]
EEB18_013910 (truB)
Enzymes [BR:
spog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EEB18_013910 (truB)
Transfer RNA biogenesis [BR:
spog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EEB18_013910 (truB)
Prokaryotic type
EEB18_013910 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QNO25877
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All DBs
Position
2899081..2900037
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AA seq
318 aa
AA seq
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MNGWIILDKPLGLGSTQAVGAVKRVCREAGLGKVKVGHGGTLDPLATGVLPIALGEATKL
CGRMLDASKIYDFTIRFGVQTDGLDAEGEVVATSDVRPTLVEVEAVLPRFTGPIEQVPPA
YSAIKIDGQRSYDLARKGEAVEMKARGVTIYSLRHAGHDPASIAATEAWTPDQVRGDDDG
GARLKEITLTAHVSKGTYIRSLARDIAHAVGTVGHVTMLRRTKAGPFDLEQAISLDKLNA
FGQGAAQSEVILPLEAGLVDIPALNLSPEAAGAIRQGRVWTGVATDDGLYWGRDDDNRPI
ALIEALAGTLKVVRGFNL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctggatcatcctcgacaaacccctggggctcggctcgacgcaggcggtcggc
gcggtcaagcgcgtgtgccgcgaggcggggctgggcaaggtcaaggtcggccatggcggg
acgctcgacccgctcgcgaccggcgtgcttccgatcgcgctcggcgaggcgaccaagctg
tgcgggcggatgctcgacgcgagcaagatttacgactttacgatccgcttcggcgttcag
accgatggcctcgatgccgagggcgaagtcgtcgcgacgagcgacgtgcggccgactttg
gtcgaagtggaagcggtgctgccgcgcttcaccggcccgatcgaacaggtgccgccagcg
tacagcgcgatcaagatcgacggccagcggtcgtatgacctggcgcgcaagggcgaagcg
gtcgagatgaaggcgcggggcgttacgatctattcccttcgtcatgccggacatgatccg
gcatccattgcggcgacggaagcatggaccccggatcaagtccggggtgacgatgacggg
ggagcgcggcttaaagaaatcaccctcaccgcgcatgtctccaagggcacctatatccgc
agcctggcgcgcgatatcgcacatgcggtcggcaccgtcggccacgttacgatgctccgc
cgcaccaaggccggaccgttcgatctggaacaggcgatttcgctggacaaattgaacgcg
ttcggccaaggcgccgcgcaatcagaagtcattctgccgctcgaggcagggctggtcgac
atcccggctctgaacctttccccggaagcggcaggggcgatccgtcagggtcgtgtctgg
accggggtagctacggacgacgggctctattggggacgcgacgacgacaatcgtccgatc
gccctgatcgaggctttggcgggaacgctgaaggtcgtgcgcggcttcaatctttaa
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