Sphingopyxis sp. OPL5: EEB18_014880
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Entry
EEB18_014880 CDS
T10726
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00300
Lysine biosynthesis
spog00470
D-Amino acid metabolism
spog01100
Metabolic pathways
spog01110
Biosynthesis of secondary metabolites
spog01120
Microbial metabolism in diverse environments
spog01230
Biosynthesis of amino acids
Module
spog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EEB18_014880 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EEB18_014880 (lysA)
Enzymes [BR:
spog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EEB18_014880 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF3645
Motif
Other DBs
NCBI-ProteinID:
QNO26059
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Position
3091922..3093181
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AA seq
419 aa
AA seq
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MNHFDLRDGVMHAEDIPLPRIAEEIGTPVYVYSRATLERHAQAFRDGLKDVPRKHLAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGI
GQFNIEHEPEGVALAEIALAKEMTAPAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
EIFARLSALPGLNMRGIAVHIGSQLTSLDPLEAAFERVGQLVAELRAAGHSITHVDLGGG
LGVPYKAEDNPPSPAEYGAMVARVTRDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGAAN
PFVIVDAAMNDLARPALYDAYHDFVAVKPSGERMTASIVGPVCETGDTFARDRETDKVEP
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYAVVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattttgaccttcgtgacggcgtgatgcacgccgaagatattccgctgccgcgc
attgccgaggaaatcggcacccccgtctatgtctattcgcgcgccacgctggagcgccat
gcgcaggcgtttcgtgacgggctgaaggatgtgcccaggaagcacctcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtgctcgcgcggcagggctatggcgccgac
gtcgtgtcgggcggcgaactcgaacgcgcgctcgcggcgggcatggcggccgaggacatc
gtcttctcgggcgtcggcaagacgcgcgccgaactggcgcagggcctcgaccgcggtatc
ggccagttcaacatcgaacatgagcccgagggtgtcgcgctcgccgaaatcgcgcttgcc
aaggaaatgaccgcgccggcggtgctgcgcgtcaatccggatgtcgatgcgggcactcat
gccaagatttcgaccggcaaggcggagaacaagttcggcgtcggcatcgacgtcgcaccc
gaaatcttcgcgcggctgtcggcgctgccggggctcaacatgcgcgggatcgccgtccat
atcggcagccagctcaccagcctcgacccgctcgaagccgccttcgaacgcgtcggccag
ctcgtcgccgaactgcgcgccgccggccacagcatcacccatgtcgatctcggcggcggt
ctcggcgtgccgtacaaggccgaggacaatccgccgagccccgccgaatatggggcgatg
gtcgcgcgcgtgacccgcgactgggacgtcacgctgatgttcgaacctggccgggtgatc
gcgggcaacaccggggtgctgctgaccgaggtgctgtgggtcaagcccggcgccgccaat
ccgttcgtgatcgtcgatgccgcgatgaacgatctcgcgcgccccgcgctctatgatgct
taccatgacttcgttgcggtgaagccgtcgggcgaaaggatgaccgcgtcgatcgtcgga
ccggtgtgcgagaccggcgacaccttcgcgcgcgaccgcgagaccgacaaggtcgagccg
ggcgacctcgcggtgttccgcaccgcgggtgcctatggcgcgacgatggcgtcgacctac
aacagccgcagcctcgttcccgaggtactcgtcgacggcgaccgctatgccgtcgtcgcc
gaccgtatcgcggcgggcacgatcatggccgccgaacgcgtgcccgactggatcgactga
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