Sphingopyxis sp. OPL5: EEB18_015655
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Entry
EEB18_015655 CDS
T10726
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EEB18_015655 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spog03019
]
EEB18_015655 (groL)
03110 Chaperones and folding catalysts [BR:
spog03110
]
EEB18_015655 (groL)
03029 Mitochondrial biogenesis [BR:
spog03029
]
EEB18_015655 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spog04147
]
EEB18_015655 (groL)
Enzymes [BR:
spog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EEB18_015655 (groL)
Messenger RNA biogenesis [BR:
spog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EEB18_015655 (groL)
Chaperones and folding catalysts [BR:
spog03110
]
Heat shock proteins
HSP60 / Chaperonin
EEB18_015655 (groL)
Mitochondrial biogenesis [BR:
spog03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EEB18_015655 (groL)
Exosome [BR:
spog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EEB18_015655 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EEB18_015655 (groL)
Exosomal proteins of breast cancer cells
EEB18_015655 (groL)
Exosomal proteins of colorectal cancer cells
EEB18_015655 (groL)
Exosomal proteins of bladder cancer cells
EEB18_015655 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
QNO26202
LinkDB
All DBs
Position
3237135..3238778
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVTKVVETIKAQSKPVSGTAEIAQVGIISANGDTEVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMLVELADPYILIFEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTAGEM
ISEDLGIKLETVTLAMLGQAKRVTIDKDNTTIVDGAGEAATIKGRVEQIRAQIETTTSDY
DKEKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGLSGINEDQTRGIDIIRRALQAPVRQIAENAGFDGGVVAGKLFDQKDTSFGFN
ASTDVYEDLVKAGVIDPTKVVRIALQDAASVAGLLITTEAGIAETPDDKPAMPMGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtcaaattctcgcgcgacgcgcgcgaacgcatcctgcgcggtgtc
gacaccctcgccgacgcggtgaaggtcaccctcggtcccaagggccgcaacgtcgtgatc
gacaagagcttcggcgcgccccgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcaaggacaagttcgaaaacatgggcgcccagatgctgcgcgaagtcgcatcgaag
gcgaacgacaaggccggcgacggcaccaccaccgcgaccgttctcgcccaggcgatcgtg
cgcgaaggcatgaagtcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgcggtcaccaaggttgtcgaaacgatcaaggcacagtcgaagcccgtttcgggc
accgctgaaatcgcccaggtcggcatcatctcggccaatggcgacaccgaagtcggcgag
aagatcgccgaagcgatggaaaaggtcggcaaggaaggcgtgatcaccgtcgaggaagcc
aagggcctcgatttcgaactcgacgtcgtcgaaggcatgcagttcgaccgcggttacctg
tcgccctacttcatcaccaacccggaaaagatgctcgtcgagctggccgatccgtacatc
ctgatcttcgaaaagaagctttcgaacctgcaggcgatgctgccgatcctcgaagccgtg
gttcagtcgggtcgcccgctgctgatcatcgccgaagacatcgaaggcgaagcgctcgcg
acgctggtggtcaaccgcctgcgcggcggcctgaaggtcgcggccgtcaaggcaccgggc
ttcggcgatcgtcgcaaggcgatgctgcaggacatcgcgatcctcaccgccggtgaaatg
atcagcgaagacctgggcatcaagctcgaaaccgtcacgctcgccatgctcggccaggcc
aagcgcgtcaccatcgacaaggacaacaccaccatcgtcgacggtgccggtgaagccgcg
acgatcaagggccgcgtcgaacagattcgcgcccagatcgaaacgacgaccagcgactac
gacaaggaaaagctgcaggaacgtctggcgaagctcgccggcggtgttgcggtgatcaag
gtcggcggcgcttcggaagtcgaagtgaaggaacgcaaggatcgcgtcgacgacgcgctg
catgcgacccgcgctgcggtcgaagaaggcatcgtccccggcggcggtacggcgctgctg
tacgcgaccaaggccctcgaaggcctgtcgggcatcaacgaagaccagacccgcggcatc
gacatcatccgtcgcgcgttgcaggctccggttcgccagatcgccgaaaacgcgggcttc
gacggcggtgtcgtcgcgggcaagctgttcgaccagaaggacacgagcttcggcttcaac
gcctcgaccgacgtctatgaagacctggtcaaggccggtgtcatcgacccgaccaaggtc
gtccgcatcgcgcttcaggatgccgcctcggttgccggtctgctgatcaccaccgaagcc
ggcatcgccgaaacgcccgacgacaagcccgccatgcccatgggcggcggcggcatgggc
ggcatgggcggcatggacttctaa
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