Sphingopyxis sp. OPL5: EEB18_017030
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Entry
EEB18_017030 CDS
T10726
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00300
Lysine biosynthesis
spog00470
D-Amino acid metabolism
spog01100
Metabolic pathways
spog01110
Biosynthesis of secondary metabolites
spog01120
Microbial metabolism in diverse environments
spog01230
Biosynthesis of amino acids
Module
spog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EEB18_017030
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EEB18_017030
Enzymes [BR:
spog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EEB18_017030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNO26442
LinkDB
All DBs
Position
3535178..3536407
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AA seq
409 aa
AA seq
DB search
MKPHGPIPPGFAADADGMLLIGGQRADDLAEDAGDTPLFVYDSKLLTARVAEWRAAMPAE
LQLHYAMKANPYGPLLGHMAAMVDGLDVASGGELKAARTSGMASGHISFAGPGKRDSELE
YAIKAGATLNLESAGEAERALAIGARLGIVPRLAVRVNPDFDLKGSGMKMGGGAKPFGVD
AAEVAALVGRLLDAGADWQGFHIFAGSQALDAGAIADTQAQTVALAARLANEIGAVPPLV
NLGGGMGVPYFPGDKAVDAKAVGDALAATLAARDPMLGASRFAMELGRWLVAEAGVYLTR
IVDRKTSHGETFLVTDGGLHHQLAASGNFGTVIRRNYPIALASQFGAEPVETVSVVGCLC
TPLDRLGDQVALPRGEVGDLVAIFQAGAYGATASPSAFLGQGPAREMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcatggtccgatcccgcccggcttcgccgccgatgccgacggcatgttgctg
atcggcggccagcgcgccgacgacctcgccgaggatgccggcgacacgccgctgttcgtc
tatgacagcaagctgctcaccgcgcgcgtcgccgaatggcgcgccgcgatgcccgccgaa
ttgcagcttcattatgcgatgaaggcgaacccctatggcccgctgctcggccatatggcg
gcgatggtcgacggactcgacgtcgcgtcgggcggcgagctcaaggccgcgcgcaccagc
ggtatggcgagcgggcacatcagcttcgcggggccgggcaagcgcgactccgaactcgaa
tatgcgatcaaggcgggcgcgacgctcaatctcgaatcggcgggcgaggccgaacgcgcg
ctcgcgatcggggcgcggctcggcatcgtcccgcgactcgccgtgcgcgtgaaccccgac
ttcgacctcaaggggtcgggcatgaagatgggcggcggtgccaagcctttcggggtcgat
gccgccgaggtcgcggcgctggtggggcgcctgctcgatgccggcgccgactggcagggt
ttccatatttttgccggatcgcaggcgcttgatgccggcgccatcgccgatacgcaggcg
cagaccgtcgcgctcgcggcgcggctcgccaatgaaatcggcgcggtgccgccgctcgtc
aatctcggcggcggcatgggggtgccctattttcccggcgacaaggcggtcgatgcgaag
gcggtcggcgatgcgctcgccgcgacgctcgcggcgcgtgacccgatgctcggtgccagc
cgcttcgcgatggaactcgggcgctggctcgtcgccgaggcgggggtgtatctgacccga
atcgtcgatcgcaagaccagccatggcgagaccttcctcgtcaccgacggcggccttcat
caccagctcgcggcgagcggcaatttcggcaccgtgatccgccgcaactacccgatcgcg
ctcgccagccagttcggcgccgagccggtcgagacggtgtcggtcgtcggctgcctctgc
accccgctcgaccggctgggcgaccaggtcgcgctgccgcgcggcgaggtcggcgatctt
gtggcgatctttcaggcgggggcttatggcgccaccgcgagcccctcggctttcctcggc
cagggtccggcgcgcgagatgctcgtttaa
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