Sphingopyxis sp. OPL5: EEB18_017260
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Entry
EEB18_017260 CDS
T10726
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00470
D-Amino acid metabolism
spog00550
Peptidoglycan biosynthesis
spog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EEB18_017260 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EEB18_017260 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
EEB18_017260 (murD)
Enzymes [BR:
spog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
EEB18_017260 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
Precursor biosynthesis
Amino acid ligase
EEB18_017260 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QNO26483
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Position
3587200..3588504
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AA seq
434 aa
AA seq
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MITSRAFAGRRYAVLGLARSGLATVEALVASGAGVTAWDDREDARDEAMALGADIGNPLD
IDLIGFAGVVVSPGVPLNRHPIAAHAREAHVPVIGDVELFAEARAELPPHKVVGITGTNG
KSTVTALVTHMLESAGIPTLMGGNIGLPILSRDPLPEGGVYVLELSSYQIDLSHSLACDV
ALLTNLTPDHLDRYDGFAGYAASKARLFSLQHRDQVAIVAVDDDPSKIIAGRINHRLFRV
SGKDVDPVDQMRWPALQGPHNAQNAVCAIAVCRVLGLNDEQIERGLATYKALPHRMELVG
EVAGVRWYNDSKATNAASAAPALAAFPPAPDQRLHWIAGGQAKGDGLSACRPWFGHVKRA
YLVGEAMDGFAAEIGDAIPVDRSGDLATAVARAAAVAEPGDIVLLSPACASFDQFKSFEE
RGDRFRAIVKAFGA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccagccgcgcctttgccggtcgccgctacgcggtgctggggctggcgcgctcg
gggctggctaccgtcgaggcgctcgtcgccagcggcgcgggcgtcaccgcatgggacgac
cgcgaggatgcccgcgacgaggcgatggcgctcggcgccgacatcggcaacccgctcgac
atcgacctgatcggtttcgcgggcgtcgtcgtgtcgcccggcgtcccgctcaaccgccac
ccgatcgccgcccacgcgcgcgaggcgcatgtgccggtgatcggcgatgtcgagctgttc
gccgaagcgcgcgcggagctgccgccgcacaaggtcgtcggcatcaccggcaccaacggc
aagtcgaccgtcaccgcgctggtcacccatatgctcgaaagcgcgggcatcccgacgctg
atgggcggcaatatcggcctgccgatcctcagccgcgatccgctccccgaaggcggggtc
tatgtcctcgaactgtcgagctaccagatcgacctgtcgcacagcctcgcctgcgatgtc
gcgctgctcaccaacctcacccccgaccatctcgaccgctacgacggtttcgcgggctat
gccgcgtcgaaggcgcggttgttctcgctccagcaccgggatcaggtcgcgatcgtcgcg
gtcgacgacgacccgtcgaagatcatcgcggggcggatcaatcaccgcctgtttcgcgtc
tcgggcaaggatgtcgaccccgtcgaccagatgcgctggccggcgctgcagggcccgcac
aatgcgcagaacgcggtctgcgcgatcgcggtgtgccgggtgctcgggttgaacgacgaa
cagatcgaacgcggcctcgccacctacaaggcgttgccgcatcgcatggaactggtcggc
gaagtcgctggcgtccgctggtacaatgacagcaaggcgaccaacgcggcttccgctgca
ccggcgctggcggcctttccgccggcgccggaccagcgtctgcactggatcgccggcggg
caggccaagggcgacgggttgtccgcctgccgtccctggttcggacacgtcaagcgtgcc
tatctggtcggcgaggcgatggacggtttcgcggccgagatcggcgatgcgattcccgtc
gaccgttcgggcgacctcgcgactgcggtcgcgcgtgcggcggcggtcgccgagccgggc
gacatcgtgttgctgtcgccggcctgcgcgtcgttcgaccagttcaagagttttgaggag
cgcggcgaccggtttcgcgccatcgtcaaggcattcggggcatga
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