Sphingopyxis sp. OPL5: EEB18_018645
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Entry
EEB18_018645 CDS
T10726
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00550
Peptidoglycan biosynthesis
spog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EEB18_018645
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spog01002
]
EEB18_018645
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
EEB18_018645
Enzymes [BR:
spog01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EEB18_018645
Peptidases and inhibitors [BR:
spog01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
EEB18_018645
Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EEB18_018645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QNO26724
LinkDB
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Position
complement(3863732..3864934)
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AA seq
400 aa
AA seq
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MAAFALLLVPAAAPAANPPAKKAPAQKAPAAVSRPLYVTQAPIVMLKDLDSGAILFSRGA
DKRFAPASMAKVMTAYVVLDLIKAGKLSRDTVFTVDDATWKQWNARRGGSTMFLRAREKV
SVDELLKGLITVSGNDAATALAVGIDGSEDAFVKRMNEVAKKIDMKSSRFGTPSGWPDGG
VTKVSAADLITLADRLIRDHPAGYARYFSISSLRHGKSPDGKPIVQPNRNPILGRFEGAD
GLKTGHTADAGYCFLGSAKRDGRRLIMVVAGMSSEKARRDEAERLMAWGFDAWEGREIVP
AGAKVGQIDVGQGAKPMLAAEAAIPVRMTVPAGYRGGYRATVRSQSPLAAPIARGTRVAD
LIVTPDGLPPQITPLLAATDVGEGGWFDRARTGFYRLTGL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ttggcggcgttcgcgctgctgctcgtccctgccgccgcgcccgccgccaatccgcccgcg
aagaaggcgcccgcccaaaaggcgccggcagcggtcagccgcccgctctatgtcacccag
gcgccgatcgtgatgctcaaggatctcgattcgggcgcgatcctgttttcgcgcggcgcc
gacaaacgcttcgcccccgcctcgatggccaaggtgatgaccgcctatgtcgtgctcgac
ctgatcaaggcgggcaagctgtcgcgcgacacggtcttcaccgtcgacgacgcgacctgg
aaacaatggaacgcccgccgcggcggctcgacgatgttcctccgcgcccgcgagaaggtg
agcgtcgacgaactgctcaaggggctgatcaccgtctcgggcaacgacgccgcgaccgcg
ctcgcggtcggcatcgacggcagcgaggatgctttcgtcaagagaatgaacgaggtagcg
aaaaagattgatatgaagtcgagccgcttcggcacccccagcggctggcccgacggcggc
gtcaccaaggtgtcggcggccgacctgatcacgctggccgaccggctgatccgcgaccat
cctgcgggatatgcgcgctatttctcaatttccagcctccgacacggcaaatcgcccgat
ggcaagccgatcgtccagccgaaccgcaacccgatcctcggacggttcgaaggggccgac
gggctcaagaccggccacaccgccgacgccggctattgcttcctcggctcggccaagcgc
gacgggcgccgcctgatcatggtcgttgcggggatgagcagcgaaaaggcgcgccgcgac
gaggccgaacggttgatggcctggggcttcgatgcctgggaagggcgtgagatcgtcccc
gccggcgccaaggtcggccagatcgatgtcgggcagggggcaaagcccatgctcgccgcc
gaagccgccatcccggtccgcatgaccgtgcccgcgggctatcggggcggctatcgcgcg
accgttcgcagccagagcccgctcgccgcgccgatcgcgcgcggcacccgtgtcgccgac
cttatcgtcacccccgacggcctgccgccgcaaatcacgccgctgctcgccgcgaccgat
gtcggcgagggcggctggttcgaccgcgcgcgcaccggcttctaccggctcaccggactg
tga
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