Sphingopyxis sp. OPL5: EEB18_018985
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Entry
EEB18_018985 CDS
T10726
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spog Sphingopyxis sp. OPL5
Brite
Messenger RNA biogenesis [BR:
spog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EEB18_018985
Ribosome biogenesis [BR:
spog03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EEB18_018985
Membrane trafficking [BR:
spog04131
]
SNARE
SNARE associated proteins
Others
EEB18_018985
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EEB18_018985
Exosome [BR:
spog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EEB18_018985
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNO29720
LinkDB
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Position
complement(3937562..3939841)
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AA seq
759 aa
AA seq
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MANARAEESGGGIARIPRAAMAELGVTEGDIVQISGKRDTASRVVLPYAEDEGLDVIRLD
GLQRANAGAGAGDMVALTRVETRPATRVVFAPAQENLRLQGSANALKRSFFGRPLVAGDT
VATAGQQRLPSGDMPPQLRQMLNAPAYALAEVRLIVVSAAPKGVVFIDENTEIELLPEYQ
EPQDARRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDPPRGVLLHGPPGTGK
TRLARAVANESDAQFFLINGPEIMGSAYGESEKRLRDVFEAATKAAPSILFIDEIDSIAP
KRGQVTGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEALRRPGRFDREIVIGV
PDESGRREILGIHTRGMPLAEDVDLGELARTTFGFVGADMAALTREAAIEAVRRIMPKLN
LEEGTIPPEVLEELRVTREDFNNALKRVQPSAMREVMVQAPKTRWSDIGGLDAARDKLIE
GIELPLKNPEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDANFISIKSSDLLSKW
YGESEQQIARLFARARAVAPTIIFIDELDSLVPARGSGTSGEPQVTERVVNTILAEMDGI
EEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPNAEGRKRILEIQTGKMPLADDVD
LSVLAEKSDRFTGADLEDLTRRAGLAALKRSIDSDTVTMTDFDTALKDTRASVTEAMEKD
YEKIQGEIKQNAMSVDPIGFFAPGMLKPVRERKHDESTD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaacgcccgcgccgaagaaagcggtggcggcatcgcccgtattccgcgcgcggcg
atggccgaactgggcgtcaccgagggcgatatcgtccagatcagcggcaagcgcgacacc
gcgtcgcgcgtcgtgctgccctatgccgaggacgagggactcgatgtgatccgcctcgac
ggcctgcagcgcgccaatgccggtgcgggtgcgggcgacatggtggcgctgacccgcgtc
gaaacgcgtcccgcgacgcgcgtggtgttcgccccggcgcaggaaaatctgcggctgcag
ggatcggcgaacgcgctgaaacgcagctttttcggccgtccgctggtggccggcgatacc
gtggcgaccgccgggcagcagcgcttgccgtcgggcgacatgccgccgcaattgcggcag
atgctcaacgcgccggcctatgcgctcgccgaagttcgcctgatcgtcgtatcggccgcc
ccgaagggcgtcgtcttcatcgacgagaataccgagatcgagctgctccccgaatatcag
gagccgcaggatgcgcggcgcaccgacgtcacttatgacgatctgggcgggctgggcgag
acgatcgaccagttgcgcgagatggtcgagctgccgctgcgttaccctgaactgttccgc
cgcctcggcgtcgatccgccgcgcggggtgctgctgcacgggccgccgggcaccggcaag
acgcggctggcgcgcgcggtcgccaacgagagcgatgcgcaattcttcctgatcaacggg
cccgagatcatggggtccgcctatggcgagtccgaaaagcggctgcgggacgtgttcgag
gctgcgaccaaggccgctccgtcgatcctgttcatcgacgaaatcgattcgatcgcgccg
aaacgcggacaggtaaccggcgaggccgaaaagcgccttgtcgcgcagttgctgacgcta
atggacgggctggaaccgcgcaccaacctggtcgtgatcgcggcgaccaatcgtcccgac
gcgatcgacgaggcgctgcggcgtccgggccgcttcgaccgcgaaatcgtcatcggcgtc
cccgacgaaagcgggcggcgcgagattttgggcatccacacgcgcggtatgccgctggcc
gaggatgtcgacctgggcgaactggcgcgcacgacctttggctttgtcggcgccgatatg
gcggcgctgacccgcgaggcggcgatcgaggcggtgcggcggataatgcccaagctcaac
ctggaggaggggacgatcccgcccgaggtgctggaggagcttcgcgtcacgcgcgaggac
ttcaacaatgcgctgaaacgcgtgcagccgtcggcgatgcgcgaggtgatggtgcaggcg
cccaagacgcgctggagcgacatcggcgggctcgacgcggcgcgcgacaagctgatcgag
gggatcgaactgccgctgaagaaccccgaggcgttccggcggctcggcattcgtccggcc
aagggcttcctgctctatggcccgccgggcacgggcaagacgctgctcgccaaggcagcg
gcgcgcgaatccgacgccaacttcatctcgatcaagtcgtccgacctcttgtcgaaatgg
tatggcgagagcgagcagcagatcgcgcggctgttcgcccgcgctcgcgccgtcgcgccg
acgatcatcttcatcgacgaactcgacagcctggtgcccgcgcgcggcagcggcacgtcg
ggcgagccgcaggtgaccgaacgcgtcgtcaacacgatcctcgccgagatggacgggatc
gaggagatgcagtcggtcgtcgtgatcggggcgaccaaccggcccaatctgatcgacccg
gcgctgctccgtccggggcggctcgacgagttgatctatgtgtcggtgcccaatgccgag
gggcgcaagcgcatcttggaaatccagaccggcaagatgccgctggcggacgatgtcgac
ctgtcggtgctcgccgagaaatcggaccgcttcaccggcgccgatctggaggatttgacg
cgccgtgccggcctcgccgcgctcaagcggtcgatcgacagcgatacggtgacgatgacg
gacttcgacaccgcgctcaaggatacgcgcgcctcggtcaccgaggcgatggagaaggat
tatgaaaagatccagggcgagatcaaacagaacgcgatgagcgtcgacccgatcggtttt
ttcgcgcccggcatgctcaagccggtgcgcgagcgcaagcacgacgagtcgaccgactga
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