Sphingopyxis sp. OPL5: EEB18_019645
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Entry
EEB18_019645 CDS
T10726
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spog Sphingopyxis sp. OPL5
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_019645
Enzymes [BR:
spog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EEB18_019645
DNA repair and recombination proteins [BR:
spog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EEB18_019645
Prokaryotic type
EEB18_019645
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QNO29732
LinkDB
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Position
complement(4075847..4077232)
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AA seq
461 aa
AA seq
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MTAPSIVWFRRDLRLSDQAALLVAAAAGPVIPVYILDDETPKHRAMGGASRWWLHHSLAS
LDAALREKGSRLILRRGKCDEQLAKIAEEYGAGQVHCLHHYEPWWRNAERAVAKSLDLVC
HDGNYLAPPGSVTTGTGNLYKIYTPFWRALKERMPPPAPANRPSEIAAPPKWPASDRLPD
WNLLPTKPDWATGFGNEWTPGEEGARTCVADFIDEARDYDRRRNLPSEEGSSRLSPHLHF
GEVSPAYVWHRLSDAGGSVDVFLSEVGWRDYAQNVILQYPDYGGCNAREAFDAFPWRTGK
AADTDLKAWQQGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWRLGEQWFW
DTLVDADYGNNSVNWQWTAGTGIDSNMFPRIMAPLTQSEKFDAADYIREWVPELLDLHAH
HVHDPDEHGVRPSGYPAKLIGHREARARALAAYDVMKAHDN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcaccctcgatcgtctggtttcgccgcgaccttcgcctgtccgatcaggcggca
ctgctcgtcgctgcggcggcggggccggtgatcccggtctatatcctcgacgacgaaacg
ccgaaacaccgcgcgatgggcggcgcctcgcgctggtggctgcaccacagcctcgccagt
ctcgatgccgccttgcgcgaaaagggctcgcggctgatcctgcgccgcggcaagtgcgac
gagcaacttgctaaaatcgccgaggaatacggggcagggcaggtccattgcctgcatcac
tacgaaccctggtggcggaacgccgagcgcgccgtcgccaagagcctcgacctggtctgc
cacgacggcaattatctcgccccgccgggatcggtaacgaccggcaccggcaacctctac
aagatctacacccccttctggcgggcgctcaaagaacgcatgccgccgccagcgccggcg
aaccgcccgagcgagatcgccgcaccgccgaagtggccggcctccgacagactccccgac
tggaacctcctccctaccaagcccgactgggcgacggggttcggcaacgaatggacgccc
ggcgaggagggcgcccgcacctgcgttgccgatttcatcgatgaagcgcgcgattacgac
cgccgccgcaacttgccgtccgaagaaggcagttcgcgcctgtcgccgcacctccacttc
ggcgaagtctcgccggcatatgtctggcaccggctctccgatgcgggcggatcggtcgac
gtgtttctcagtgaggtcggctggcgcgattatgcgcagaatgtcatcctgcaatatccg
gattacggcggttgtaacgcccgcgaagccttcgacgccttcccttggcgcaccggcaag
gcggccgacaccgacctcaaagcctggcaacagggccgtaccggctatccgatcgtcgat
gccgggatgcgccagctctgggcgaccggctggatgcacaaccgggtgcggatgatcgcg
gcgagtttcctgatcaagcatctgctgatcgactggcggctcggcgagcaatggttctgg
gacacgctggtcgacgcggattacgggaacaacagcgtcaactggcagtggaccgccggc
accggtatcgattcgaacatgtttccgcgcatcatggcgccgttgacgcagtcggagaag
ttcgatgcggcggactatattcgcgaatgggtgccggaattgctcgatcttcacgcacat
cacgtacatgacccggatgaacatggggtacggccgtcgggctatcccgccaagctcatc
gggcatcgcgaggcgcgggcccgggcgcttgcggcgtatgacgtcatgaaggcgcacgac
aattga
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