Sphingopyxis sp. OPL5: EEB18_019675
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Entry
EEB18_019675 CDS
T10726
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EEB18_019675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spog03019
]
EEB18_019675
Messenger RNA biogenesis [BR:
spog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EEB18_019675
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QNO26908
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Position
4082767..4083243
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AA seq
158 aa
AA seq
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MIDHSSLPYRPCAGVMLANRDGRVFVGQRLDTTSEAWQMPQGGIDPGEDAEMAAIRELGE
ETGVHGGLVEIIARSREEYFYDLPDHLIGKMWGGKYRGQRQHWFLMRFMGEDSDVNIATE
HQEFRAWRWSDLNEIEKLIVPFKRALYRSLVEEFGPLV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcatagcagcctgccctatcgcccctgcgccggggtgatgctggccaatcgc
gacgggcgggtgttcgtcgggcagcggctcgatacgacgagcgaggcctggcagatgccg
cagggcgggatcgaccccggcgaggacgccgagatggcggcgatccgcgaactcggcgag
gaaaccggggtgcatggcgggctggtcgagatcatcgcacgcagccgcgaggaatatttc
tatgacctgcccgaccatctgatcggcaagatgtggggcggcaaatatcgcggccagcgc
cagcactggttcctgatgcggttcatgggcgaggacagcgacgtcaatatcgcgaccgaa
catcaggagtttcgcgcctggcgctggtccgacctgaacgagatcgagaaattgatcgtg
ccgttcaagcgcgcgctttaccgttcgctggtcgaggagttcgggccgctggtctga
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