Sphingopyxis sp. OPL5: EEB18_021050
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Entry
EEB18_021050 CDS
T10726
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spog Sphingopyxis sp. OPL5
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spog03032
]
EEB18_021050 (gyrA)
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_021050 (gyrA)
Enzymes [BR:
spog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EEB18_021050 (gyrA)
DNA replication proteins [BR:
spog03032
]
Prokaryotic type
DNA Topoisomerases
EEB18_021050 (gyrA)
DNA repair and recombination proteins [BR:
spog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EEB18_021050 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QNO27164
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Position
4380593..4383328
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AA seq
911 aa
AA seq
DB search
MTEENTPTPPPSDGISPINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSAF
ESGYVAGRPYRKSARIVGDVMGKYHPHGDSSIYDALARMTQDWSMSVPLVDGQGNFGSMD
PDPPAAMRYTESRLAKVANTLLGDLDKDTVDFQPNYDGSESEPTVLPARYPNLLVNGAGG
IAVGMATNIPPHNLGEVINATLATIDDPDISLEDLMAIIPGPDFPTGAMMLGQGGARNAY
ATGRGSIMMRSTYVIEEGRGDRQSIVLTAIPFQVGKSGLVEKIAEAARDKRIEGVADIRD
ESNREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMMGLKTILSAF
IDFREEVITRRCKFELNKARDRAHILLGLVVAVSNLDEVVRIIRGSPSPAAARDALLARE
WPIGDIAPYIRLVEAIDGEMDDSASYRLSEVQVKAILDLRLHRLTALGRDEIGKELKELA
DEIEGLLAILADREKLYAVMREELVAVRDEFAKPRRTLLAPAADGIDDEDLIEREEMVVT
VTLDGYIKRTPLDTFRAQRRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTLGKVYRM
KVWRLPEGGPATRGRPMINLLPLGKDETISTVLPLPEDEAEWGKLHVMFATAKGNVRRNS
MDAFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLASRQGKAIRFAGDDVREFQS
RNSTGVRGMRLGEGDEVISLSILHRVGTTGDEREAYLRAAPWKDNENEPTLTPDRMAELT
AREQFILTICANGYGKMSSAYEYRRTGRGGQGITNIDNIGRNGLVVASFPAVQADQLMLV
TDQAKLIRMGLDSLRVIGRGSAGVRLFDVANDEHVVSAALIGDSDEDTEEGDDETPAVDD
AAEPAPDGATE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaagaaaatacgcctacgccgccgcccagcgacggcatttcgccgatcaacatc
gtcgacgaaatgaagacctcctatctcgattacgcgatgagcgtgatcgtcagccgcgcg
ctgcccgacgtgcgcgacggcctgaagcccgtgcaccgccgcatcctctattcggcgttc
gaaagcggctatgtcgccggccgcccctatcgcaaatcggcgcgcatcgtcggcgacgtc
atgggtaaatatcacccgcatggcgacagctcgatctacgacgccctcgcgcgcatgacg
caggactggtcgatgagcgtgccgctcgtcgacggccagggcaatttcggctcgatggat
cccgatccgccggcggcgatgcgctacaccgaatcgcgcctcgccaaggtcgcgaacacc
ctgctcggtgatctcgacaaggacaccgtcgatttccagcccaactatgacggctcggaa
tccgaacccaccgtcctccccgcgcgctatccgaacctgctggtcaacggcgcgggcggc
atcgcggtcggcatggcgacgaacatcccgccgcataacctcggcgaagtgatcaacgcg
acgctggcgacgatcgacgatcccgacatcagcctcgaagacctgatggccatcatcccc
ggccccgatttcccgaccggcgcgatgatgctcggccagggcggcgcgcgcaacgcctat
gccaccggtcgcggctcgatcatgatgcgatcgacctatgtcatcgaggaaggccgcggc
gaccgccagtcgatcgtcctcaccgccatcccgttccaggtcggcaagtcgggcctggtc
gagaagatcgccgaggcggcgcgcgacaagcgcatcgagggcgtcgccgacatccgcgac
gaatcgaaccgtgagggcgtgcgcgtcgtcatcgagctgaagcgcgacgcgaccgccgag
gtcgtgctcaaccagctctggcgccacacccccgcccagtcgagcttccccgccaacatg
ctcgcgatccgcggcggccgccccgaaatgatggggctcaagacgatcctgtcggcgttc
atcgacttccgcgaggaggtgatcacccgtcgctgcaagttcgaactcaacaaggcgcgc
gaccgtgcgcatatcttgctaggcctcgtcgtcgcggtcagcaacctcgacgaggtcgtc
cgcatcatccgcggatcgcccagcccggcggcggcccgcgacgccttgctcgcgcgcgaa
tggccgatcggcgacatcgccccctatatccgcctcgtcgaggcgatcgacggcgagatg
gatgatagcgcttcgtatcgcctgtccgaagtccaggtgaaggcgatcctcgacctccgc
ctgcaccgtctcaccgccctcggccgcgatgagatcggcaaggaactcaaggagttggcg
gacgagattgagggattgcttgcgatcctcgccgaccgcgaaaaactctatgccgtgatg
cgcgaagagctggtcgcggtgcgcgacgaattcgccaaaccgcgccgcacgctgctcgcg
cccgccgccgacggcatcgacgacgaggatctgatcgagcgcgaggagatggtcgtcacc
gtcaccctcgacggctatatcaagcgcaccccgctcgacaccttccgcgcccagcgccgc
ggcggcaagggccgcgccggcatggcgacgaaggacgaggatgtcgttaccgagctgttc
gtcacttcgacgcacaccccggtgctgttcttctcgaccctcggcaaggtctaccgcatg
aaggtgtggcgcctgcccgagggcgggccggcgacgcgcggccggccgatgatcaacctg
ctgccgctcggcaaggacgagacgatctcgaccgtcctcccgctgcccgaggacgaggcc
gaatggggcaagctccacgtcatgttcgcaaccgcgaagggcaatgtgcgtcgtaacagc
atggacgctttcaccaacgtgccatcgaacggcaagatcgcgatgaaattcgaaggcgag
gacgaggatgatcgcctgatcggcgtcgccttgctcgacgaaagcgacgatgtgctgctc
gccagccgccagggcaaggcgatccgcttcgccggcgacgatgtccgcgaattccagagc
cgcaattcgaccggcgtgcgcggcatgcgcctcggcgagggcgacgaggtgatctcgctg
tcgatcctccaccgcgttggcaccaccggcgacgagcgcgaggcctatctgcgcgccgcg
ccgtggaaggacaacgagaatgagccgacgctgaccccggaccggatggccgaactgacc
gcgcgcgagcagttcatcctgacgatctgcgccaacggctatggcaagatgtcctcggcc
tatgaatatcgccgcaccggtcgcggcggtcaggggatcaccaacatcgacaatatcggc
cgcaacggcctcgtcgtcgccagcttccccgcggttcaggccgatcagctgatgctcgtc
accgaccaggccaagctgatccgcatgggactcgattccttgcgcgtcatcgggcgcggc
tcggcgggcgtgcggctgttcgacgtcgccaacgacgagcatgtcgtgtcggcggcgctg
atcggcgacagcgacgaggacaccgaggaaggggacgacgaaacgcccgcggtcgacgac
gctgccgaacccgcacccgacggcgcgaccgaatga
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