Sphingopyxis sp. OPL5: EEB18_021765
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Entry
EEB18_021765 CDS
T10726
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog00550
Peptidoglycan biosynthesis
spog01100
Metabolic pathways
spog01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EEB18_021765 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EEB18_021765 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
EEB18_021765 (mrdA)
Enzymes [BR:
spog01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EEB18_021765 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
spog01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EEB18_021765 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QNO27291
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All DBs
Position
4510147..4512054
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AA seq
635 aa
AA seq
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MPRKKSPPITEAWRGMTFTRRALLVGGGQMVIGAALATRMAYISVVENDRYVLESESNRV
NLTLTPPRRGWIVDRHGKALANNRVSLRIDLIPDRLHNKDMVLGQLRTLLRLDGDAMDRI
NRDLKAASGFQPVAVAEDLSEGDYASILVRLPELSGVAPQRGFARNYPTGAAVGHLIGYV
GAPNAEEYQKDKDPLYITPGYKIGKDGLEKYFQPMLKGTPGAKRVEVTARGKVVRDLTTT
SDIQGKTVHLTIDADLQEYVARRMGRESGAAIVIDCTNGDILSFVSMPSFDPNSFSDGIS
NSEYAWLRADDHQPLINKATRGLYPPGSTLKPMAAIAAIEHGVHPSERHTCIGGYRLGNR
FFRCLGTHGSLDMPSAIMKSCNSYFYWLADRLGYDAIAPTARLMGLGEEFQLAGSSQRYG
TIPDSAWKMKKYDQKWSASDSLNSVIGQGYVSVNPLQLAVMAARIASGRRLYPRLINREF
KNEPLPFSPEALAVARHGMDLVVNGAGTAVRSRLPLDGITMAGKTGTAQVRGLGTGNGKS
GTWKFRDHGLFIGFAPVVNPRYATAVVIEHGMGGARAAAPIAKDFMTFLFDREKAMEALD
TFEAGWGGTIKERMDRDYAAWKSGASSDPEPGVPQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaaaaaaagtccaccgatcaccgaagcctggcggggcatgaccttcacgcgc
cgcgcgttgctcgtcggcggtggacagatggtcatcggtgccgcgctcgcgacgcgcatg
gcctatatatcggttgtcgaaaacgaccgctatgtgcttgaatccgaaagcaaccgtgtc
aatcttacgctaaccccgccgcgccgcggctggatcgtcgaccggcatggcaaggcgctc
gccaacaaccgcgtgtccttgcgcatcgacctcatccccgaccggctgcacaacaaagat
atggtgctcggccagcttcgcaccctgctgcggctcgacggcgatgcgatggaccggatc
aaccgcgacctcaaggcggcctcgggattccagccggtggcggtcgccgaggatctgtcc
gagggggactatgcatcgatcctcgtccgcctgcccgaactgtccggcgtcgctccgcag
cgcggctttgcgcgcaactatcccaccggcgcggcggtcggccatctgatcggctatgtc
ggcgccccgaatgccgaggaatatcaaaaggacaaggacccgctctacatcacgccgggg
tacaagatcggtaaggacgggctcgagaaatatttccagccgatgctgaagggcaccccg
ggcgcgaagcgcgtcgaggtcaccgcgcgtggcaaggtcgtgcgcgacctgacgaccacg
tcggacatccagggcaagaccgtccatctgacgatcgacgccgacctgcaggaatatgtc
gcgcggcggatggggcgcgagtcgggcgctgcgattgtcatcgactgcaccaatggcgac
atcctctccttcgtctcgatgccgagcttcgatccgaacagcttttcggacgggatcagc
aacagcgaatatgcctggctgcgtgccgacgatcatcagccgttgatcaacaaggcgacg
cgcggcctgtatccgcccgggtcgacgctgaagccgatggcggcgatcgccgcgatcgaa
catggcgttcacccgagcgaacgtcacacctgcatcggcggctaccgcctcggcaaccgc
ttcttccgctgcctcggcacccatggcagtctcgacatgccgtcggcgatcatgaaaagc
tgcaacagctatttctactggctcgccgaccggctgggctatgacgcgatcgcgccgacc
gcgcggctgatgggcctcggcgaggaattccagcttgcgggcagcagccagcgttacggc
accattcccgacagcgcgtggaagatgaagaaatacgaccagaaatggtcggcctcggac
tcgctgaactcggttatcggacagggctatgtcagcgtgaacccgctccagctcgccgtc
atggcggcgcggatcgcgtcggggcgccggctgtatccgcgcctgatcaaccgcgaattc
aagaacgagcccctgcccttttcccccgaagcgctcgccgtcgcccgccacggcatggac
cttgtcgtcaatggcgccggcaccgcggtgcgcagccgcctgccgctcgacggcatcacc
atggccggcaagaccggcaccgcgcaggtgcgcggactgggcacggggaacggcaagagc
gggacatggaaatttcgcgaccacggcctgttcatcggcttcgcgccggtcgtcaatcca
cgttacgcgaccgccgtcgtgatcgaacatggcatgggcggcgcgcgcgccgcagcgccg
atagcgaaggatttcatgaccttcctgttcgatcgcgaaaaggcgatggaggcgctcgac
acctttgaggccggctggggcggcacgatcaaggagcggatggaccgcgactatgcggca
tggaaatcgggcgcatcgagcgaccccgagcccggagttccgcaatga
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