Sporosarcina sp. ANT_H38: GGGNBK_04510
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Entry
GGGNBK_04510 CDS
T10925
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh00521
Streptomycin biosynthesis
spoh00523
Polyketide sugar unit biosynthesis
spoh00525
Acarbose and validamycin biosynthesis
spoh00541
Biosynthesis of various nucleotide sugars
spoh01100
Metabolic pathways
spoh01110
Biosynthesis of secondary metabolites
spoh01250
Biosynthesis of nucleotide sugars
Module
spoh_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GGGNBK_04510 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GGGNBK_04510 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GGGNBK_04510 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GGGNBK_04510 (rfbB)
00525 Acarbose and validamycin biosynthesis
GGGNBK_04510 (rfbB)
Enzymes [BR:
spoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GGGNBK_04510 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Methyltransf_25
adh_short
Methyltransf_11
KR
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
XKI10887
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Position
945937..946947
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AA seq
336 aa
AA seq
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MNILVTGGAGFIGGNFVQYMVDKYPQYDIYNLDLLTYAGDLTKHREIEQKVNYHFVKADI
ADREVINSLFEKEKFDYVVHFAAESHVDRSITNPGIFVQTNILGTQVLLEASKKIGVSKF
VHVSTDEVYGELDFDPTTFFTEDTPIQPNSPYSASKASSDLLVRAYHETYGLPVNITRCS
NNYGPYHFPEKLIPLTISRVLNKQKVPVYGDGKNIRDWLHVLDHCTAIDLVLHEGANGDV
YNIGGHNERTNLEVVKTIISTLGKSEELIEFVADRLGHDKRYAIDPTKLEQLGWKPTYTF
ETGIAQTIQWYLDNKAWWEQIICGDYENYFEEQYSV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttagtgaccggcggagcaggatttatcggtgggaattttgtgcaatacatg
gtagataaatatcctcagtatgatatttataatttagatttactaacatatgctggagat
ttaacgaaacatcgtgaaattgagcaaaaggttaattatcattttgttaaagcggatatt
gcagaccgtgaagttataaactccctatttgagaaagaaaaattcgactatgtcgttcat
ttcgctgcagaaagtcatgttgatcgttcaattacaaatccagggatttttgttcagacc
aatatattggggacacaggtattacttgaggcatcaaaaaaaatcggcgtttcaaaattt
gtacatgtctcaactgacgaagtatatggagagcttgattttgatcctacaacatttttc
actgaagatacacctatacagccgaatagtccatacagtgcaagtaaagcatcatctgat
ttactagtacgtgcttatcatgagacatatggtttacctgttaatattacgcgttgttcg
aataattatgggccataccacttccctgagaagttgattcctttaacgatttcgagagtt
ttgaataaacaaaaagtccctgtgtatggtgatggtaaaaacattcgtgactggttacat
gtattagatcactgtacggcgattgatttagtgctacatgaaggtgctaatggtgatgtg
tataatataggtggacacaatgaacgcacaaatttagaagttgtgaaaacaattattagt
actttagggaaatcagaagagctaatagaatttgttgctgatcgcctaggccacgataaa
cgttatgcaattgatccaacgaaattggaacagttaggctggaaaccaacctatacattt
gaaactggaattgcccaaacgattcaatggtatcttgataacaaagcatggtgggagcaa
attatttgcggggattatgagaattattttgaagagcagtattcggtttaa
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