Sporosarcina sp. ANT_H38: GGGNBK_08060
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Entry
GGGNBK_08060 CDS
T10925
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spoh Sporosarcina sp. ANT_H38
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spoh03016
]
GGGNBK_08060 (truB)
Enzymes [BR:
spoh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GGGNBK_08060 (truB)
Transfer RNA biogenesis [BR:
spoh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GGGNBK_08060 (truB)
Prokaryotic type
GGGNBK_08060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XKI11584
LinkDB
All DBs
Position
1669132..1670043
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AA seq
303 aa
AA seq
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MDGILPLWKEKGMTSHDCVFKLRKILGTKKVGHTGTLDPSVEGVLPICIGQATKVAEYVT
DSGKEYIAVVSIGTATETEDADGAVVTSDLSPKHITRTEIEAALTKLTGEIVQIPPMYSA
VKVNGRKLYEYARKGIEVERPERKVFIHEIELLDTVQWYEGETISFRIRVACGKGTYIRT
LAVQIGELLGFPAHMAALVRTSSGTYVQTDCRTLDEVRALQEEGQIATILRPLEDALSSF
ATVEISEELIEKVENGQVLDEHPLLESEESIVFMNEGKALAVYKKHPTKLGLMKPEKMFP
LNR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggacggaatacttcctctatggaaagaaaaaggtatgacttcgcatgattgtgtcttc
aaattgcggaaaattcttggtacgaaaaaagttggacataccggtacacttgacccgagc
gttgaaggtgtattgccgatttgtattggacaggcgacgaaggtggctgaatacgttacc
gattctggcaaggaatatattgcggttgtttccataggaactgcaactgaaacggaagat
gcagacggggcggtagtcactagtgacttgtccccaaaacatattacacgaacggaaatt
gaagcagcgcttacgaagttaactggtgaaattgtccaaatcccaccaatgtattctgca
gtaaaagtaaacggtagaaaattatatgaatatgcacgtaaaggaattgaagttgaaagg
cctgaacgaaaagtattcattcatgaaattgaattgttggatactgtacaatggtatgaa
ggtgaaacaatctctttccgtatcagggttgcgtgcggaaaaggaacgtatatccgaacg
cttgctgtccaaataggggaactgcttggtttccctgcgcatatggccgcacttgtcaga
acatcgtcaggaacttacgtgcagacagactgcaggacgttggatgaagtgagggcactt
caggaagaaggacaaatcgcaacgatacttcgacctcttgaagatgcacttagtagtttc
gcgaccgttgaaatcagtgaagagctcattgaaaaagtggagaatggtcaagtattggat
gagcatccactacttgaaagtgaagagtcaatcgtatttatgaatgaaggcaaggcactt
gcagtatacaagaagcatcctaccaagcttggtctcatgaagcctgaaaagatgtttccg
ttgaacaggtaa
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