Sporosarcina sp. ANT_H38: GGGNBK_09535
Help
Entry
GGGNBK_09535 CDS
T10925
Symbol
lysM
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
spoh Sporosarcina sp. ANT_H38
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
PD40
LysM1_NFP_LYK
DPPIV_N
LysM2_CERK1_LYK3_4_5
PsbP_2
Beta-prop_RIG_2nd
Beta-prop_EML_2
Motif
Other DBs
NCBI-ProteinID:
XKI11878
LinkDB
All DBs
Position
1997234..1999054
Genome browser
AA seq
606 aa
AA seq
DB search
MQLFYVVRPGDTLIRIAKRWELPVKSLIAANNLTSPYTISVGQQLSIPPGVNKYRVKSGD
SVDRISQTFGVPASLIAETNRLSPPYVLAVGQLLQIPPGVSYYVAQPGDTLSKIANRFNV
TTDGQINPGYLQKVNELPSTGINPGMKLVVPYAPTGYPGFLAYTSNRGGQYDIWVYNPRT
GENKLLTNGLGDVFSKPVWSPDSNRIAFVGKDRIIYIIYAETGLIAGIDQLEVGVDFSLD
WSPDSSSLAYVARGMILLYNATLHEAETIMQSGASDVSWFPSGTELLFQAPDSSGISQLF
RSNTYGTAKKQITRNTNGPLHDTHLSPDGTFAFYTTPGASVSIIYTVEIATGAVHEVKGG
PNGKNYFPEWSPDSLRIAYSATAFEDRGYFAQIRTVDRQGSEDRIWAISNCFSTPVTWSP
DGRRIAYLSGCKEQEFATEMWVIDLGHPVPIRLIEGVNIVSVQWSPTSILDLLKKEFTSE
KFGVNFQYPASWQRVNDERYEGDDGFFQISALVGSNSIDRVCHDVAYQKSMPYGSAPQII
KTQNSYEQSCTILPSADQPIEMKGQAAFITEYPSPQTIDGVSYNYFILWADKEHINEIST
TIMFLP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttttttatgtagttcggcctggtgatacattaattcgcatagctaagcggtgg
gaacttccagtgaaatcacttattgccgcaaataatttaacgtctccgtatacaatctct
gtagggcaacagctatcaattccgcctggtgtcaataagtaccgtgtgaagtcgggtgat
tctgtggatcgaatttcccaaacgtttggtgttcctgcttctttgatagctgaaacaaat
aggcttagtccaccttatgtcttagcggttggtcagttactccagataccgcctggtgtt
tcttattacgtcgcccaacctggggacacattgagtaaaattgctaatcgtttcaacgta
acgacagatggtcaaattaaccccgggtatctacagaaggtcaatgaactcccgtccacg
gggattaatccaggaatgaagttagtcgttccttacgctcctacgggttacccaggattt
cttgcatatacatccaatcgtggagggcagtacgatatttgggtttataatccgcgaact
ggggaaaataaactgcttacaaatggtttaggtgatgtattctcaaagccagtttggtcg
ccagatagcaatcgaattgcatttgtcgggaaggatagaattatctatattatttacgct
gaaacgggtttaattgccggtattgatcagttggaagtaggagtagattttagtctcgat
tggtctccggatagttccagtttggcttatgtagctcgaggaatgatcttgttgtataac
gccacgcttcatgaagcggagacaattatgcaatccggcgcatcagatgttagttggttt
ccgagtggcacggagttactgtttcaagcgcctgatagttctggtataagtcagcttttc
cgaagtaatacgtacggaacggctaaaaagcaaattactagaaatacaaacggtcctctt
catgatacacatttatcgcctgatggtacttttgctttctatacaacaccaggagcaagt
gtttcaatcatttacaccgtggaaattgctacaggtgctgtacatgaagtgaagggtgga
ccaaacggcaaaaactacttcccagaatggtctccggattctttacggattgcctatagt
gcaaccgcatttgaggatagaggctactttgcgcaaattagaactgtggaccgtcaaggg
agcgaggatcggatatgggcgatttcgaattgtttttctactccggtcacatggtcacca
gatggaagaagaattgcttacctttctggatgtaaagagcaggaatttgctactgagatg
tgggtgatcgatttaggtcatcccgtcccaatacgacttattgaaggggtaaatatcgtg
tcagtgcaatggtcaccaacgtcgattctagatttgttgaaaaaggaatttacgagtgaa
aaatttggtgttaactttcaatatcctgcaagttggcagagggtgaatgatgaaaggtac
gaaggtgatgatggcttttttcaaatttcagctcttgtaggatcgaattcaattgacagg
gtatgtcatgacgtagcttatcagaaatcaatgccctatggctcggcgccacaaataatc
aaaacacaaaattcatatgaacagtcctgcacaattttaccttctgctgaccaaccaatt
gaaatgaaagggcaggcagcttttatcacagaatatccaagtccacaaacgattgatggg
gtgtcctataattactttatattatgggcagataaggaacatattaacgagatttcaaca
actatcatgtttttaccgtaa
DBGET
integrated database retrieval system
