Sporosarcina sp. ANT_H38: GGGNBK_10525
Help
Entry
GGGNBK_10525 CDS
T10925
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spoh Sporosarcina sp. ANT_H38
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_10525
Enzymes [BR:
spoh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GGGNBK_10525
DNA repair and recombination proteins [BR:
spoh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GGGNBK_10525
Prokaryotic type
GGGNBK_10525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Adeno_52K
Motif
Other DBs
NCBI-ProteinID:
XKI12075
LinkDB
All DBs
Position
2192101..2193540
Genome browser
AA seq
479 aa
AA seq
DB search
MKKILVWFRKDLRIHDNPALWEAAQQGIVIPVFIWSEEEEREYATSEASHWWLHHSLLSL
KKKLESKGLLFVIRLGNCLKELTTIIEQTNADAVFYGERYEPSILKRDQAICKRLTENGI
EVRSFQSNLLFPPGDLLNQKNDPYKVFTSFWKRTMKETVQRPLPIPDEFAAYDQAHLSVQ
IDELGLLPAIRWDEKFHAYWEPGEKGAIARWQQFTEEGLSRYVEGRDSPSADSVSLLSPH
LAWGDISVRSIWHAAKRLTDEETEEYMHTSVEAFLRQLIWREFAYHQLIHFPTMVHSPLR
EQFKGFPWLGSDEEFARWQKGLTGYPLVDAGMRELWETGAMHNRVRMVVASFLVKHLLIS
WTEGSTWFKETLVDYDVANNAMGWQWVAGTGIDAAPYFRIFNPILQSKKFDADGEYIRKW
LPELASLSSKYLHEPWKAPADKLLEAGIELGTTYPLPIIDHSLARHRALEAFAKVKNNS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatacttgtttggttcaggaaagatcttcgcattcatgataatcccgcatta
tgggaagctgctcagcaaggaattgtaatcccggttttcatctggtctgaggaggaagag
cgagaatacgcaacgagcgaagcgtcacattggtggctacatcattcattgctttcctta
aagaaaaaacttgaatcgaagggcttattgttcgtaattagacttggcaattgcttaaaa
gaactcactactattattgaacagacaaatgccgatgcagttttttatggtgaaaggtat
gagccatcaattttaaaaagagatcaggcgatttgtaaacgtcttactgaaaatgggata
gaggttcgttcttttcagtcaaatttgctgtttccgccgggtgatttattgaatcaaaag
aatgatccttataaagtttttacatcattttggaaaagaaccatgaaggaaactgtccaa
cgtccactgcctattccagatgagtttgcggcgtatgatcaagctcatctatctgtacaa
atagatgagcttggtttattacctgcaattcgctgggatgaaaagttccacgcatattgg
gagccaggagaaaagggtgctattgcaagatggcaacagtttacagaagaggggcttagt
cgctacgttgaaggtcgcgatagcccatctgcagattcggtgtcattactgtcgcctcat
ttagcatggggagatatcagcgtcaggtcaatttggcacgcagctaaaagacttactgat
gaggaaacagaagagtatatgcatacatccgtcgaggcctttctaaggcaattaatatgg
cgcgagttcgcgtatcatcaacttattcatttcccaacaatggtgcattcgcctctacgt
gaacagtttaaagggtttccatggctgggatcagatgaagagtttgcgaggtggcaaaaa
ggcttgacgggctatccgcttgtcgatgccgggatgagagaattatgggagacgggtgcg
atgcataaccgggttcgcatggtagtcgcttcatttctagtcaaacacttgctcatttct
tggacagaaggatctacctggtttaaggaaacgcttgtcgattatgatgtcgcgaacaat
gccatgggctggcaatgggtggcgggtacaggtatcgatgcagcaccttatttccgaata
tttaatccgatcctgcaaagcaagaaatttgatgctgacggagagtacatccggaaatgg
cttcctgaactcgcaagcctgtcatctaagtatttacatgagccatggaaagcgcccgct
gataaattacttgaagcaggcatcgaacttgggacaacttatccgcttcccatcattgat
cattcacttgcaaggcaccgtgctttggaagcattcgcaaaagtgaaaaataactcgtaa
DBGET
integrated database retrieval system
