Sporosarcina sp. ANT_H38: GGGNBK_12035
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Entry
GGGNBK_12035 CDS
T10925
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh00300
Lysine biosynthesis
spoh00470
D-Amino acid metabolism
spoh01100
Metabolic pathways
spoh01110
Biosynthesis of secondary metabolites
spoh01120
Microbial metabolism in diverse environments
spoh01230
Biosynthesis of amino acids
Module
spoh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GGGNBK_12035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GGGNBK_12035 (dapF)
Enzymes [BR:
spoh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GGGNBK_12035 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XKI12373
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All DBs
Position
2464479..2465387
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AA seq
302 aa
AA seq
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MFTKMHGLGNSYVIFNQLETEMVYQDYNYLAQIVSDVNFGIGSDGIILIGSSDIADFQMR
IFNVDGSEAKNCGNGLRCVAKILFDQKYATTSPFTIETLGGVVSVELDVDNEKNVQYVTV
DMGEPKLLKNMIPMQGDPFAVAIDEPHSFRGEVYRITCVSMGNPHAIMFVDDVNEVLLDK
IGPEIENSDLFPDRINVGIVHVKNSREIDYRVWERGSGITMACGTGACAAVVAATLNDMV
DRHLPITVHLPGGDLTVSWDEDGRVLKRGKATYICQGELDKDICIIGSMIDESNDIRRNG
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactaaaatgcatggattgggtaactcctatgttattttcaatcaattagaaact
gaaatggtctatcaagactataattatcttgcccaaatagtctctgatgtgaacttcggt
atcggatctgacggcataatcctaataggctcttcggatatagcagattttcaaatgaga
atttttaacgtggatggatcggaagcgaagaattgtggcaacggtttgcgttgtgtagca
aagattctttttgatcaaaagtacgctacaacatccccttttacaattgaaacattgggt
ggggtagtgagcgtagaactggatgtagacaatgaaaaaaacgtgcagtatgtaactgtc
gatatgggagagcccaaactattaaaaaatatgataccgatgcaaggagatccattcgcg
gttgcgatagatgaaccgcattcatttagaggtgaagtgtatcgcataacttgtgtatcg
atggggaatccacatgcgatcatgtttgtcgatgatgtgaatgaagttctgttagataaa
ataggtcctgagatagaaaattccgatttatttccagatcgaataaacgtcggcattgta
catgtcaaaaatagccgagaaattgattatcgagtgtgggaacgaggatcgggcattaca
atggcttgtggaacaggcgcttgcgctgcagtagtggctgctaccttaaacgatatggtt
gacagacatcttccaatcacagtacatcttcctggtggagacttgacggtaagttgggat
gaagatggacgcgtattgaaaagaggaaaagcgacatatatctgccaaggagaactggat
aaagacatctgtattataggttccatgatagatgaaagtaatgatattagacggaatggg
aggggttaa
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