Sporosarcina sp. ANT_H38: GGGNBK_13005
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Entry
GGGNBK_13005 CDS
T10925
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh00630
Glyoxylate and dicarboxylate metabolism
spoh00680
Methane metabolism
spoh01100
Metabolic pathways
spoh01120
Microbial metabolism in diverse environments
spoh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GGGNBK_13005 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
GGGNBK_13005 (fdhF)
Enzymes [BR:
spoh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GGGNBK_13005 (fdhF)
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Paralog
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4
Fer2_4
Fer4_6
Fer4_7
Fer4_2
Fer4_8
Fer4_21
LdpA_Fe-S-bd
Fer4_10
Fer4_9
Fer4_15
EndoS_Ig-like
Fer4_13
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
XKI12566
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All DBs
Position
complement(2654911..2657847)
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AA seq
978 aa
AA seq
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MRIKINDSGYDFVEGKTILEVINQYQISHPQICYLPEVDPIETCDTCILEVDGRLVRACS
TKAVSGMNVALSSTRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKIHNTVDMMGIEHQK
YPYEPKCTQESVDFTHPFYRYDPNQCIACGQCVEVCQNLQVNETLSIDWERDRPIVLWDG
GAKINDSSCVGCGHCVTVCPCNALMEKSMLGEAGFMTGLKEQILSPMIELVKEVEPGYSG
IMAISDAESAMRDTRTKKTKTVCTFCGVGCSFEVWTKDRKILKIQPVSDAPVNAISTCVK
GKFGWDFVNSEERITTPLIRKGDSFVEATWEEALDLVALKLGTTKKEHGKEAIGIISSSK
ITNEENYVIQKLARQVFETNNVDNCSRYCQSPATDGLFRTVGMGGDAGTIKDIAKAGLVI
IVGANPAEGHPVLATRVKRAHKLNGQKLIVADLRRNEMADRSDIFISPKQGTDQVWLMAV
TKYMIDKGWHDQSFIDENVHYLDEFKDVLLQYTLDYAEKVCGISKDMLIKTAEMIRDADG
TCILWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGACDMGSLPGW
LPGYQHVTDDLARQKFEKAYGVKIDNKPGLDNIQMLHSIDDGIMKAMYIVGEDMALVDSN
SNYVHDVLSKLEFLVVQDIFFSRTAQYADVILPAVPSLEKDGTFTNTERRVQRLYKALPE
LGNAKADWWIVQEIANRLGADWNYRHPGEIFAEMASLSPLFSQADYSVMKGWDSFLWGSL
DGKSTPLLYEDGFNFPDKKARFALSDWVPPVEFPEEYDLHINNGRLLEHFHEGNMTNKSD
GIQEKVPEVFVEVSPELAKERGVLSGSLVRLISPYGSLKLPALVTDRVKKNELFLPMNSV
EKESAINFLTGPAVDHRTNTPAYKQTRVRMEVLRKDGKNPLPKSNHRNKKRNPQNGVEVD
QKWARPEYVHLTEHLKER
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtatcaagattaacgattcgggttatgacttcgtggaaggcaagacgattcttgag
gtgatcaatcaatatcaaatctctcatccgcaaatatgctacttacctgaagtggacccg
attgagacgtgtgatacgtgtatattggaagtggatggtcgactagtacgtgcctgttca
acaaaagcagtttctggaatgaatgtagcactttcttctactcgggctaaggaagcacag
acagaggctatggatcgaattcttgaaaatcacctgttgtattgtacagtgtgtgacaac
aacaatggtaactgcaaaatacataataccgtggatatgatgggaattgaacatcaaaaa
tatccgtatgaaccaaaatgtacacaagaaagtgttgattttacacatccgttttaccgt
tacgacccgaatcaatgcattgcctgcggccagtgtgtagaagtgtgtcaaaacctacag
gtaaatgaaaccttatcgattgattgggagagggatcgtccaattgttctatgggatggg
ggagcgaaaatcaatgactcctcctgtgtcggatgcgggcactgtgttaccgtttgtcca
tgcaatgcgctgatggaaaaatcaatgcttggtgaagctggattcatgaccggactaaaa
gagcaaattctgtcgccaatgatcgaacttgtcaaagaggtagagcctggctatagcggg
attatggctatttccgatgctgaatccgcgatgcgcgatacgaggacaaagaaaacgaaa
acagtttgtacattctgcggtgttggttgttcttttgaagtgtggacaaaggaccggaag
atattaaaaatccagcccgtatcagatgcaccagtaaatgcgatttcaacgtgtgtaaaa
gggaagttcggttgggatttcgtcaacagcgaagaacgaattacgacaccacttattcga
aaaggcgattcttttgtagaagctacatgggaagaagctctcgatctcgttgctttaaag
ctcggtacaaccaaaaaagagcatggaaaagaagctatcggtatcatttcatcttcgaag
attacaaatgaggaaaactatgtcattcaaaagttagcccgccaagtatttgaaacaaat
aacgttgataactgttcacgctattgtcagtctccagcgacagacggtctattccgtaca
gttgggatgggtggagacgctggaaccatcaaagatatagctaaagcgggacttgtcatt
attgttggagctaacccagctgagggacatccagttcttgccactcgtgtgaagcgtgca
cataagttgaatgggcaaaaattgattgtcgctgacttacggagaaacgaaatggctgat
cgctccgatatctttataagtcctaagcaagggaccgaccaagtatggctcatggcggtg
acaaaatacatgattgataagggatggcatgatcagtcgtttattgatgaaaacgttcat
tatttggatgaattcaaagatgtacttctacaatatacactcgactatgctgaaaaagta
tgtggtatatcaaaagatatgctaatcaagacagcagaaatgattcgtgatgcagacggt
acttgtattctttggggaatgggtgtcacacaaaataccggtggatcagacacttcagct
gcaatatctaatttgttgcttgcgacaggtaattatcgacgccctggtgcaggagcctat
ccgctgcgagggcataataatgtacagggtgcatgtgatatgggatcactaccgggatgg
cttccaggttatcaacatgttactgatgatttggcccgtcagaaattcgaaaaggcatac
ggtgtgaaaatcgataataagcctggtcttgataatattcagatgctgcattcgatcgat
gatggaatcatgaaagctatgtatatagtcggtgaggatatggcgctcgtcgattctaat
tcgaactacgtacatgatgtcttgtctaaactcgaatttcttgttgtgcaggatattttc
ttctcaagaacggctcaatatgcggatgtcattttacccgcggttccatcgcttgaaaaa
gacggtacgtttacaaatacggagagacgcgtgcaacgtttgtacaaagctcttccggaa
ttaggcaacgcaaaggcggactggtggattgttcaggaaatcgctaaccgtctcggtgca
gattggaactacagacatccaggtgagatttttgcagaaatggcgagtctatcaccatta
tttagtcaagcagattatagcgtgatgaaaggctgggacagcttcttatggggtagtttg
gatggtaaaagcacaccgttattatacgaggacggatttaacttcccggataaaaaagca
cgtttcgccctgtctgactgggtgccacccgtagaatttccagaagagtatgatctccat
attaataacggacgcttacttgaacatttccacgaaggtaatatgacgaataaatcggat
ggaattcaggagaaagtaccagaggttttcgttgaggtttcaccggaacttgcgaaagag
cgtggcgtgttaagcggatcccttgtacgcctgatttcgccatacggttctttgaagctt
ccggcacttgtaacggaccgtgtgaagaaaaatgaattattcttgccgatgaattcggtt
gaaaaagaatcagctattaacttcctaactgggccagctgtagatcaccgaacgaacaca
cctgcttataagcagacacgggtgcgaatggaagtacttcgaaaagacggtaaaaacccg
ttgccaaagtcgaaccatcgtaataaaaagcgtaaccctcaaaatggtgtggaagtggat
cagaaatgggcgcgtcctgaatatgtacatttgactgagcatttgaaagaaaggtga
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