Sporosarcina sp. ANT_H38: GGGNBK_14260
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Entry
GGGNBK_14260 CDS
T10925
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03030
DNA replication
spoh03430
Mismatch repair
spoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GGGNBK_14260 (holA)
03430 Mismatch repair
GGGNBK_14260 (holA)
03440 Homologous recombination
GGGNBK_14260 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoh03032
]
GGGNBK_14260 (holA)
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_14260 (holA)
Enzymes [BR:
spoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GGGNBK_14260 (holA)
DNA replication proteins [BR:
spoh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GGGNBK_14260 (holA)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GGGNBK_14260 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
HTH_3
HTH_37
Motif
Other DBs
NCBI-ProteinID:
XKI12815
LinkDB
All DBs
Position
complement(2956495..2957529)
Genome browser
AA seq
344 aa
AA seq
DB search
MEEVNNVATAIWKKIAAGEIDPVYLLTGLEQHLFDSTITRLKKALPDIDAASVIRFDLDE
TPVEAVIEEADTLPFLEDRKLIIAGNASFLKASDKTREKVTHNLELLEAWLANPSPTATV
VFIAPYEKLDARKRITKIIKEHATVIESKRLEGKDLFTWIQQEAGANGSRIGPADAEFLV
KMAGADLLTLSSEIGKMATYLNGEGDITADIIESLVPRTPEMDVFRLTDAYVSGKVSKTV
AIYHDLLRNGEEPIMLTSLIASQVRLMVHVGLLQKKGYQQHQIAKTLSVHPYRVKLMMEN
RSLPSSERLLLILNKLAGIDYKLKSSSGKRERILELFFMEPLRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaggtgaataatgtggcgactgcaatatggaagaaaatagccgcaggggaaatc
gatccggtctacttattgactggtctcgaacagcatctattcgactccacaattactcgg
ctgaaaaaagcattacctgacattgatgctgcatcagttattcggtttgacttagacgaa
acacctgtagaggcggtcattgaagaggcagatacactaccattcctcgaagaccgtaaa
ttgatcattgctggaaacgcatcatttttaaaagcgtcagataaaacccgagaaaaagtg
acacataatttggagctattggaagcatggctggcaaatccgtcaccgaccgcaacggtt
gtatttatagcaccttatgaaaaactggatgcacgaaaacggattactaaaataataaaa
gaacatgcgactgttattgaatcaaaacgactggaagggaaagatcttttcacgtggatt
cagcaggaagcgggggcaaatggatcacgaattggaccagctgacgcagagtttttagtg
aaaatggcgggggcggatttgctgacattgtcatctgaaattggtaagatggctacatat
ttgaacggtgaaggagacatcacagctgacattattgagtcgcttgtacctcgtacacca
gaaatggatgtcttccgcttaactgatgcgtatgtatctggaaaagtatcgaagacggtc
gcaatctaccatgacttattacgtaacggtgaagaaccgataatgttgacatcactcatt
gctagtcaggtaaggcttatggtgcatgtgggtttacttcagaaaaaaggatatcaacaa
catcaaattgcgaaaaccttaagtgttcatccataccgcgtgaaattaatgatggagaat
agaagtttgcccagctcggagcgtttactgttaatcttgaataaacttgcgggtattgac
tataaattgaaatcatcaagtgggaaaagggaacgaatcttagagttgttctttatggag
cctttaaggaaataa
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