Sporosarcina sp. ANT_H38: GGGNBK_14475
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Entry
GGGNBK_14475 CDS
T10925
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03410
Base excision repair
spoh03430
Mismatch repair
spoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GGGNBK_14475 (recJ)
03430 Mismatch repair
GGGNBK_14475 (recJ)
03440 Homologous recombination
GGGNBK_14475 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_14475 (recJ)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GGGNBK_14475 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GGGNBK_14475 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GGGNBK_14475 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PA28_N
Motif
Other DBs
NCBI-ProteinID:
XKI12856
LinkDB
All DBs
Position
complement(2998412..3000739)
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AA seq
775 aa
AA seq
DB search
MKRWKVERPDEQLVTMLTKDLGISSVQAKILASRGIIDSDVAKEFLHMDASSMHDPFLLY
DMDKAVSLITTAIASDKKIAVYGDYDGDGVTSVTVLTTALERMGADVFYAIPNRFKHGYG
PNKDLFLELYEQGASLIITVDNGISGVDEIAYAKSLGMDIIITDHHEIGEVLPAADAIIH
PRHPAGEYPFGELAGVGVAFKLACALLEDIPEDLFELVAIGTVADLVPLRDENRYFVKEG
IRQMRVSKRPAIQALARIASTEQATLSEESIGFMIGPRLNAAGRLGDATPAVQLLKTDDA
TLATTLAKELDTLNKERQAIVAAIAKEVEDMILKMYGDTVPLVFVIGGEGWNAGVVGIVA
SRLTEKYYRPSIVLSIDRETGIAKGSARSIDGFDMFAELSKNAELLPHFGGHQMAAGMSL
AVTDVVTLRENLNRQAEQVLTEEMLTPEVRIDVPLSISEIDVSVLESLELLRPFGMAFEK
PVYMLEDITATTVRKIGAAKNHMKLELADEGVSLDAIGFGLGPIADQLTPGVKLSVTGDL
QVNEWNGNKKPQLLISDIRSDDWQLFDLRGVREASRWLPTIPLDDTLFVAFHEQTVTHFQ
SSMKGIVITLFGQETISKAENLVLLDIPDDVNQLEELVDSIRPDRIYAHFHASESKYFDG
IPDREQFGWYYSFLKKREKFDFVTNGEQLTKHKAWKKDTLYFMSKVFSELGFVKMEDGFV
SVQETAGKRDLTEAPSYKERERQIELEKRLLYAPYMELKQWFDIMRNGIVDREEH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatggaaagtggaacggccggatgaacaacttgtaacgatgttgacgaaggat
cttggtatttcatcagtccaggcaaaaatacttgcttcaaggggaataatagattccgat
gtggcaaaagaatttttacatatggatgcatctagcatgcatgacccttttttactatat
gatatggacaaagcagtctcactcataacaacggcaatcgcttcagataagaaaattgcc
gtatatggcgattatgacggtgacggcgtgacgagtgtgacagtcctgacaacggcattg
gaaagaatgggtgcagatgtgttttatgcgatacccaatcgattcaagcatggctatgga
ccgaataaagacctgttcttggagctgtatgaacaaggggcctcgcttataattacagtc
gacaatggcatttccggcgttgatgaaattgcttatgcgaaatcactcggaatggacatc
ataattacagatcatcatgaaatcggtgaagtgttgccggctgcagatgctatcatccat
cctcgtcatccagcaggggaatatccgttcggagaacttgctggagttggtgtggcattc
aaacttgcgtgtgcgttactggaagatattccagaagatttatttgaactagttgctatc
gggacagttgcagacttagttccgcttcgtgatgaaaacagatatttcgtcaaagagggc
attaggcagatgcgtgtttcaaagcgacctgctatccaggcgctcgcacgcatcgctagc
actgaacaagcaacactctccgaggagtcaatcggatttatgattgggccccgtctgaat
gctgctgggcgtctaggcgatgctacacctgcagtccagttattgaagacagatgacgca
acgctagcgacaacattagcaaaagaactcgatacgctgaataaagaacgacaagcgatt
gtagctgcaatagctaaagaagtggaagacatgattttgaaaatgtatggtgatacagtt
cctctcgtcttcgttatcgggggagaaggctggaatgctggtgttgtgggaatcgtcgct
tcaagattaactgaaaaatattatcgcccgtccatcgtcttgtcgattgatagggaaaca
ggtattgcaaaagggtctgcaagaagtattgatggttttgatatgtttgcagagctatct
aaaaatgcagagctattacctcactttggaggacatcagatggcggccggtatgtctctt
gcggttacagacgttgtcacgctgcgtgaaaatcttaatagacaggcagaacaagtgctg
acagaagaaatgcttacgcctgaagtgcgaatcgatgttccgctgtcaattagtgaaatt
gatgttagcgttttggaatcgctggaactgctacgtccgtttggaatggcttttgaaaag
cctgtttatatgctcgaagatattactgccacaactgtacggaaaattggtgcggcaaag
aatcatatgaagctggaattagcggatgagggcgtttcactcgatgccatcggattcgga
ctaggtcctattgctgaccaattgacaccaggtgtaaagttgtcggtcacgggcgatttg
caggtgaatgaatggaatggtaataagaagcctcagttattaatcagcgatatccgttct
gatgattggcagctgtttgatttacgaggtgtgcgtgaagcatcaagatggctgccaacc
attccgctagacgacacattatttgttgctttccatgaacaaacggtgacacattttcaa
tcatccatgaaggggattgtcattactctattcggacaagaaacaatatcgaaggcagaa
aatcttgtccttttagatataccggacgatgttaaccagcttgaagaacttgtggattct
atccgtccagaccgtatctacgcacacttccatgcatccgaatcaaagtattttgatggg
attcccgatcgagaacagtttggctggtattacagtttcttgaaaaaacgtgagaagttt
gacttcgttacgaacggagaacaactcacaaaacataaagcgtggaaaaaagacacgctt
tatttcatgtcaaaggtgttttctgagctaggatttgttaagatggaagatggttttgtt
tctgttcaggagacggccggaaaacgcgatttgacggaggcgccatcttacaaagaacgc
gaacgtcagatcgagcttgagaaaagactgctatatgcgccatatatggaactgaaacaa
tggttcgatattatgcgaaatggaattgtcgacagggaggaacactaa
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