Sporosarcina sp. ANT_H38: GGGNBK_14520
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Entry
GGGNBK_14520 CDS
T10925
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GGGNBK_14520 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_14520 (ruvB)
Enzymes [BR:
spoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GGGNBK_14520 (ruvB)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GGGNBK_14520 (ruvB)
RecFOR pathway proteins
GGGNBK_14520 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
WHD_RuvB
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
nSTAND3
NB-ARC
AAA_22
AAA_3
RNA_helicase
MCM
DUF815
bpMoxR
AAA_25
TsaE
AAA_24
Sigma54_activ_2
NTPase_1
Bac_DnaA
AAA_18
NACHT
NPHP3_N
AAA_17
AAA_PrkA
ABC_tran
IstB_IS21
Parvo_NS1
AAA_28
nSTAND_NTPase5
AAA_7
ATPase_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
XKI12865
LinkDB
All DBs
Position
complement(3009285..3010295)
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AA seq
336 aa
AA seq
DB search
MEERVISGEVSEFDERFEQSLRPQFLTQYIGQEKVKENLSIFIEAAKGRSESLDHVLLYG
PPGLGKTTLATVIANEMDVNIRMTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCLDIVVGKGPSARSIRLDLPPFTLIGATTRAGALSAPLRDRFGVPLRLE
YYDVAPLKEIVIRSAGLFEVAIDEQAAVEIARRSRGTPRIANRLLRRVRDYAQVRGNGSI
TIDIANDALEMLQVDSHGLDHIDHKLLTGMIERFRGGPVGIDTISASIGEESVTIEDVYE
PYLLQIGFIQRTPRGRIATRLAYEHFGYPVPEHNDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgtgttatttccggagaagtatcggagttcgatgaacgttttgaacaatcg
cttagaccgcaatttctgactcaatatatcggacaggaaaaagtgaaagaaaacctcagt
attttcatcgaagcagcaaaaggccgcagcgaaagtttagaccatgtcctattgtatgga
ccaccgggtctcggaaagacgacgctcgcaaccgtcattgccaatgaaatggacgtcaat
atccgaatgactagtggccctgcaattgaacgccctggtgatctcgcagctgtcgtttca
tctctcgaaccgggagatgtgttgtttatcgatgaaatccataggttaaaccgtgcaatc
gaagaagtgttgtatcctgcgatggaagacttttgtttggatattgttgtagggaaaggg
ccatctgcacgctcgatacgactcgatttaccgccattcacactgatcggggcaacaaca
cgtgcaggcgcattatctgcgccgctaagagacaggttcggcgttccacttcggcttgag
tattacgatgttgctccactcaaggaaatcgtcattcgcagtgcagggctttttgaagtg
gctatcgacgagcaggcggctgttgaaattgcccgccgttcccgtggtactccgcgtatt
gcaaacaggctgttacgccgtgtgcgagattatgcacaagtaagaggcaacggcagcatt
acaattgatattgcaaatgacgcgcttgaaatgctgcaagtcgattcacatggtcttgat
catattgaccataagttgctaactggaatgattgaacgctttcgtggcggacctgttggg
attgatacgatatccgcaagtattggcgaagagtcggtgacaattgaagatgtctacgaa
ccctatcttcttcaaattggctttatccagcggacgccgcgcggacggattgcgactcgt
cttgcatacgagcatttcggctatccagttcccgagcacaacgatttctaa
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