Sporosarcina sp. ANT_H38: GGGNBK_15715
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Entry
GGGNBK_15715 CDS
T10925
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03030
DNA replication
spoh03430
Mismatch repair
spoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GGGNBK_15715 (dnaE)
03430 Mismatch repair
GGGNBK_15715 (dnaE)
03440 Homologous recombination
GGGNBK_15715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoh03032
]
GGGNBK_15715 (dnaE)
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_15715 (dnaE)
Enzymes [BR:
spoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GGGNBK_15715 (dnaE)
DNA replication proteins [BR:
spoh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GGGNBK_15715 (dnaE)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GGGNBK_15715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP
tRNA_anti_2
HROB
MamS_MamX
Motif
Other DBs
NCBI-ProteinID:
XKI13102
LinkDB
All DBs
Position
complement(3265559..3268642)
Genome browser
AA seq
1027 aa
AA seq
DB search
MTLVYPQVVTGADLLRGINKLDYLAPLLKRRGAKAVAIVNSKLYGVQSFYKVMKKHEIRP
VIGLSIFLEIGEGVAVLLYVYAKDDEGYRNLLKMSSAVSVRDSETLPLQWLKAYSKGCII
VYPLTDVSWGPSLSDIEEVFQRVIKDCDKSSIIIGVARAGGVRHPDEELIEKIADITNTP
IAAVYESRYSDKEDAFAYEVAEAIRTGFKLNDPARPENRQKAAYIPEEIELTEWFSDRPE
WLTNTSDILLSCDAALPPSQSLMPVFPVSVGETATRLLEQNSMKGLKKRLGKVDEAYEER
LLYEISVISEMGFADYFLIVEDFMRYAKENAILTGPGRGSSAGSLVAYALGITDVDPIKY
GLIFERFLNPGRVTMPDIDIDFADNRRAEVIDYVAQKYGKTNVAQIITFGTLSARSVARN
VARVFDFSNEEMAYLSKEIPNRHRITLEAAVAESRALQDWIAIDPLRSDWLKAAMSLEGL
PRNASTHAAGVILSPVPLVEVVPLQSGADGIYLTQWPMGEVEEQGLLKMDFLGLRNLTLL
DRIRSMIAYDKGIRLDFENIPLNDEKTFELFRAGDMMGIFQFESDGMRDALRLIRPTKFE
DIFAINALYRPGPMDNIPLYSRRKNENEKITYIHPLLESVLKETYGVIVYQEQIMEIAVR
VAGFTMGEADLLRRAVSKKNRVNLEKERIRFTQKAIENDFPENAAVAIYDLIVKFADYGF
PKSHAVAYSLISYQLAYLKANEPAYFYAALLSSMTGNNDKAMELMRESEVVGVKILPPSI
KRSKYTYTVEKGAIRIGLGAIKGVTPTFYDALKRARKSGGNWKTLFDMAASVGGDVFTEK
AIGPLVKAGALDEFGESRAILLASIDAAISHALFIRPDDGDDLLSEVLRSVASPKYSPGG
TMPRMTLLEFEREVLGFYLSEHPAAEAKKAAGGGFHTISSIDTIPDRAYVKMVGLVIEIK
RIRTKKGESMAFVTIQDETGQISCTLFPKQYTISESQLTEMTIIHVEGTVERRRGKPQIL
VQQTKNS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
ttgacacttgtctatccgcaagtagtaactggcgcagatcttctgcgtggcatcaataaa
cttgattatctagccccgcttctgaaaaggagaggggctaaagccgtcgcgattgttaac
tcgaaattgtacggcgttcagtcattttataaagtgatgaaaaaacatgaaatccgcccg
gttatcgggctatctatctttttggaaattggagaaggggtagctgtcctactttatgtc
tatgcaaaagatgatgaaggctatcgaaatctactgaaaatgagcagtgccgtatctgta
agagattctgaaacgctgccgctgcaatggttgaaagcatatagtaaaggctgtattatc
gtttatccgttgacggatgtatcttggggaccctccttatcagacattgaggaagttttc
cagcgagtcataaaggactgcgacaagtcatcgattatcattggtgttgccagggcagga
ggtgtcagacatcctgatgaagaattaattgaaaaaattgcagatataactaatacgcct
atagctgcggtctatgaaagcaggtactccgacaaggaagatgcattcgcttatgaagtt
gcagaagcgattcgcacaggattcaagctaaatgacccggctaggcctgaaaacaggcaa
aaggctgcatatattcctgaggaaattgaacttacagaatggttctctgacagacctgaa
tggctcacgaacacgtcggacatcctcttatcatgcgatgcggcattgcccccaagtcaa
tcgcttatgcctgtatttccggtttcggtaggagaaacagcgacaagattactggagcaa
aatagcatgaagggtttaaaaaaacgactaggcaaagtggatgaggcatatgaagaacgt
ctcctttatgagattagtgtaattagtgagatgggctttgctgattacttcctgattgtc
gaagattttatgcgttacgccaaagaaaatgctatcttgacggggccagggcgggggtct
tctgccggatctctcgttgcttatgcgcttggcatcacagatgtagatccgattaaatat
gggcttatttttgaacgatttctcaatcccggccgggtaacaatgccggatattgatatc
gactttgcggataatcgacgtgcagaagtaattgactatgtcgcacagaaatacggcaag
acaaatgtcgcacaaatcattacgtttggtacgctttccgccaggtcagtcgcccgaaat
gtggcacgtgtatttgacttttcaaatgaagaaatggcctacttatccaaggaaattcca
aatagacatagaattacgcttgaagcggcagttgcagaatcgagggcgttgcaagattgg
atcgcaattgatccgctgcgaagtgactggcttaaagcagcaatgagccttgaagggttg
ccccgtaatgcatcgacgcatgctgcgggtgtcattttatcgccagttccacttgttgaa
gtggtaccacttcaaagtggggcggatggaatttaccttacccagtggccaatgggagaa
gttgaggaacaaggtttattgaaaatggatttccttggtctgcgtaacttaactttacta
gaccgtatcaggtcgatgattgcctatgataaaggaattcgtttggattttgaaaatatt
cctttaaacgatgaaaagacattcgaactctttagagccggagatatgatgggcattttt
caatttgaatcagatggaatgagagatgcgcttcgcttgatacggccaactaaattcgaa
gatatttttgcgattaacgcactttaccgaccgggcccgatggacaatataccactttat
agcagacgtaaaaatgaaaatgaaaaaataacgtatattcatccgctacttgaatcagtt
ttgaaagaaacatatggcgttatcgtttatcaagaacaaattatggaaattgcggttcgc
gtggcaggattcacgatgggtgaagcggatctgctaaggcgtgccgtcagtaaaaagaat
cgagtgaatctagaaaaagaacgaattcgttttacacaaaaagccatcgaaaatgatttt
cctgaaaatgcagctgttgcaatttatgatctaattgtaaagtttgcggattacggattt
ccgaaaagtcatgctgttgcatactcactcatttcataccagcttgcttatttgaaagcg
aatgaacccgcatatttttacgctgcactcctttcatcaatgactggaaataatgacaaa
gcaatggagttgatgcgcgaatctgaggtagtaggtgttaaaattcttccgccgtctatt
aagcgcagtaaatatacgtatacagttgagaaaggggccattcggattggtcttggagct
attaaaggtgtgacgcctacattttacgatgctttaaagcgtgcaaggaagtctggtggg
aattggaaaacattatttgatatggcagcatcagttggtggtgatgtgttcactgagaag
gcgattggaccgcttgtaaaagcaggggcactcgatgagttcggagaatcacgggctatt
ttactcgcctcgattgacgcggcgatatctcatgcgttgttcatccgccctgatgatggc
gatgatttattgagtgaagtacttcgttcggtagcaagcccaaaatattctccagggggt
acgatgccgcgcatgacgttgctcgaatttgaaagagaagtgcttggtttctatctttca
gaacaccctgcagcagaagcgaaaaaggcagcgggcggtggatttcatacgatttcttcg
attgacacaattccggaccgcgcgtatgtgaaaatggtaggtctagttatcgagattaaa
cgaataagaacgaaaaaaggcgaatcaatggcatttgttacgattcaagatgagacggga
caaatttcttgtactttatttccaaaacaatatacgatttcagaaagtcagcttactgaa
atgacgataatccatgtcgaaggaactgttgaacgtcgtagagggaagccacaaatactt
gttcaacaaacgaaaaatagttaa
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