Sporosarcina sp. ANT_H38: GGGNBK_16115
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Entry
GGGNBK_16115 CDS
T10925
Symbol
dgaE
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh00450
Selenocompound metabolism
spoh00970
Aminoacyl-tRNA biosynthesis
spoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GGGNBK_16115 (dgaE)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GGGNBK_16115 (dgaE)
Enzymes [BR:
spoh01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
GGGNBK_16115 (dgaE)
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Motif
Pfam:
Beta_elim_lyase
SelA
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
T4_RIIA1
Motif
Other DBs
NCBI-ProteinID:
XKI13182
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Position
complement(3353840..3354952)
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AA seq
370 aa
AA seq
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MSLNNLDLKKVINASGRMSILGVSTLSDAVVDQLAYGAKNYFEMEELVKKSGEVIAYYLN
AEAAIITNSASAAIALAVAGLITKKDKMLVDKLHDKNYKTNGEIIVMKGHNINYGAPVEV
MIRLGGAEVKEVGYSNMCSADQVQAAITNETVGFLYVKSHHCVQKNMPSIDQVQEVCHRN
GIPLLIDAAAEEDIHSYASLGDLVIFSGSKAIEGPTSGILAGKKQYIDYSFPHLKGIGRA
MKVGKESIFGLLTALENYESTKQSVDFQTEKLKPLYKLSEIKGISVTCINDEAGRDICRG
RIMVNEKEANRHAVEVVNELKNGEVAIYTRDYHATEGHFDIDPRSVTKDDILLITRRIEE
IVGEAHEVKS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttgaataatttggatttgaaaaaggttattaatgcaagtggaagaatgagtatc
ttgggtgtgtctacgttatcggatgcagtagtagatcaactagcgtatggcgcaaaaaat
tactttgaaatggaagagctagtgaagaaatcaggtgaagtgatagcatattacttaaat
gcagaagctgctattattacaaactctgcttcggctgctatagctcttgcagtagccgga
cttataacaaaaaaagataaaatgttagtggataaattgcatgacaagaattataaaacg
aatggcgagatcattgtaatgaaagggcataacattaattatggggcacctgtggaagta
atgattcgtcttggcggggcagaggtcaaagaagttggttatagtaatatgtgctctgct
gaccaagtacaagcagcaattacaaatgagacagtaggttttttgtatgttaaatcgcat
cattgtgtacaaaaaaatatgccttctattgatcaagtacaagaagtatgtcataggaac
ggtattcccttgttaatcgatgctgcagctgaggaagatattcattcatacgctagttta
ggtgaccttgttatttttagtggctcaaaagctattgaaggtccaacatctgggatttta
gctggaaaaaaacaatatatcgattacagcttcccccatttaaaaggaattggtcgtgct
atgaaagtaggaaaggaatccattttcgggttacttacggctttggaaaactatgagtcg
accaaacaatcagtagattttcaaacagaaaagttaaaacccctatataaattaagtgaa
ataaaaggaatatccgttacctgcataaatgacgaggcggggcgtgatatctgcagggga
aggattatggtgaatgaaaaagaagctaatcgtcatgcagttgaagtagtaaatgagtta
aaaaatggtgaagtggctatttatacaagagattaccatgcgacggaaggtcattttgac
attgatccaagatctgtgacgaaagatgatatactcctgataacgcggagaattgaagag
attgtaggtgaagcacatgaagttaagtcctaa
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