Sporosarcina sp. ANT_H38: GGGNBK_16185
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Entry
GGGNBK_16185 CDS
T10925
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spoh Sporosarcina sp. ANT_H38
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_16185
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GGGNBK_16185
Archaeal homologous recombinant proteins
GGGNBK_16185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
ABC_tran
nSTAND3
RNA_helicase
DUF7252
Motif
Other DBs
NCBI-ProteinID:
XKI13196
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Position
complement(3370307..3373384)
Genome browser
AA seq
1025 aa
AA seq
DB search
MRPIKLTMTAFGPYKGTEIVDFKELKDNQLFVISGATGAGKTTIFDGICFALYGQASGED
RMDNRAMRSDFAEDVVQTSVELIFDIHNRRYRITRQIPYVKQGNKTETTARYEFYEITDD
GELPIVDRQIVSEINKKAEELIGFTQAQFSQIVMLPQGEFRKFLTSDTENKETIMRKIFK
TDKYREIVEQLKVKKDGAQATLKKEMQLSEGHIGQISSLLPERESSIFTVLENEHYNVNQ
VVLGLEEELVFYQEKTIVVKQSYEEVYKQHTKMQEAYHAAKNVNERFVELRQKEVSLTEL
SEQLPVMERKEQQIIDAERAVAIGEIESQFLTMKEEASAKADNLKKSEEAVQLATEIMGN
AKQRFEIEEGRKEERGKLTEVLMRLNDYLPAVSSLASKEAALDLMKKEIIRLEKELGISI
KTASEEAEKLEILKSEIESSEERLVSYDERLDQLNDMTQKCKVLDEFIVIQKRINVLEKE
KNDNKIRYENREMECDKFEKLWLDNQASMLAESLIDGESCPVCGSEHHPVKSHKKTGENI
SREQLEVKKELLKEVEGQYRNTTITYQNAIEQLDEKEKELNLLTIEVDNNNLQEDKQKLE
TEVTKLRNERKVLIYLKEKLKKQELITSQFIVKKSDMERALLQQQSSYDTQLAVFNMTLQ
TIPVDVRVLSILQERISETEKNKAELDLAWEAVQKLRDEAIHRLTTAKSAEVHASKSLDE
IIEKRNYAENRFKKALKESSFLTEEAYRQVIMKEVDRNSLKEEVVAFKQQLHTVRGAVEE
LRLMLEGKEVVDLGNLAAKVIELKSVYEAALTDYNASSEYEKTAFGLKEKLVQSSEKVIG
LERIYGKITDLYDIVRGQNGLKLSFERFIQIEYLERIIQSANERLKEMSNGQFVLIRSDR
QEVRGRQSGLGLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMADVIQSFQGSVSIDTM
FIDEGFGSLDEESLNKAIDTLIDLQKSGRMIGVISHVEELKAAFPAILEVKKAKEGHSHT
KFSIK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
ttgagacctattaaattaacgatgacggcattcgggccatataaagggacagaaatagtc
gatttcaaagaactgaaagataatcagttgtttgtcatttcgggtgcaactggcgcgggg
aaaacaacgatattcgatgggatttgttttgcgctgtatggtcaggcgagtggagaagat
cgaatggataaccgagcgatgcgcagtgacttcgccgaggatgtagtccagacgtcagtt
gagttgatattcgacatacataatcggagataccgtatcacgcggcaaattccgtatgtg
aaacaagggaacaagactgaaacgactgcacgctacgagttctatgaaataacggatgac
ggtgaattaccgattgttgacaggcaaatcgtatctgaaattaacaagaaagcagaggaa
ctgattggtttcacacaagcacaattcagtcaaatcgtcatgctgcctcaaggggaattc
cggaaatttctcacctctgatacagaaaataaagaaacgatcatgcggaaaatatttaaa
acagataagtaccgtgaaattgtagaacagctgaaagtgaagaaagacggtgcacaagcg
accctgaagaaagaaatgcaactgagcgaagggcatattggacaaatatcctccttgcta
ccggaacgggagtcgtcgatttttactgtactggaaaatgaacattacaatgtgaatcaa
gttgtactagggttagaagaagaacttgttttttatcaagaaaagacaatcgttgttaaa
cagagttatgaagaagtttacaaacagcatacaaaaatgcaagaagcctaccatgctgcg
aaaaatgtgaatgaacgctttgttgaactgcggcaaaaagaggtttcgctaactgaatta
tccgagcaactgccggtaatggaacggaaggaacaacagattattgatgcggaacgagcg
gttgcaattggtgaaatcgagagtcagtttcttacgatgaaagaggaagctagcgcgaaa
gccgacaacctcaagaaatctgaggaagcagtccaactagcgacagaaataatggggaat
gctaaacagcgtttcgaaattgaagaagggcgtaaagaagaacgtggaaaactaacagaa
gttttgatgcgactaaacgattatctccctgcagtttcaagtttagcatcaaaagaagct
gcgcttgatttgatgaaaaaagaaattatccgtttggaaaaagaactaggaatatccatc
aaaacagcaagtgaagaagctgagaagttagaaatcctgaaatcggaaatagaaagctct
gaagaaagacttgtttcctatgatgaacgacttgatcaattaaatgacatgactcaaaaa
tgtaaagtgctggatgaattcatcgtcatccaaaaacggattaacgtcctggagaaagaa
aagaatgacaataaaatacgttatgaaaatcgggaaatggaatgcgataagttcgaaaaa
ctttggttggataaccaggcatctatgttggccgaatcacttatagacggagagtcatgc
ccggtttgcggaagcgaacatcatccggtcaaatcgcataaaaaaacgggagagaacatt
tctagggaacagcttgaagtgaaaaaagaactgttaaaagaagtagaaggtcaatacaga
aatactactattacctatcaaaatgcaatagaacagttggatgaaaaagaaaaagaattg
aatctgttaactatagaagtggacaataataatttacaagaggataaacagaaactggaa
acggaagtgactaagcttcgtaatgaacgtaaagtacttatttacctaaaagagaaactg
aaaaagcaagaattgattacgtcacagtttattgtgaaaaaatctgatatggaacgtgca
ttgttgcaacagcaatcttcctacgatacgcaattggctgtatttaatatgacattacaa
acgattccagtagatgtgcgtgtactttccatcttacaagaacgaatctccgaaacagaa
aaaaataaggcagaattagaccttgcatgggaggctgttcaaaaacttagggatgaagct
atacatcggctaacgacagcgaaatccgcggaggttcatgcgagtaaatccttagatgaa
atcatagagaagagaaattatgcggaaaacagatttaaaaaagcgctaaaagaatcctca
tttctgacagaagaagcgtatcggcaggtgataatgaaagaagtggatcgtaattcttta
aaagaagaagttgtagcgttcaaacagcagctccatactgtgcgcggagccgtagaggaa
ttgcgattgatgctagaaggcaaagaagtggtggatctaggaaatctggcagcaaaagta
atcgaattgaaaagtgtttatgaagccgcactgactgattataatgcttcgtcagaatat
gaaaagactgcatttggcttgaaagagaaacttgtccaatcctctgaaaaagtgattggg
ctcgaacgaatatatgggaaaattacagacctttacgacattgtaagagggcaaaatgga
ttgaaactatctttcgagcgttttattcaaatcgaatacttggaacgtattatccaatcg
gcgaatgaaaggctgaaagaaatgtcgaacggacaatttgtcttaatccgcagtgaccgg
caggaagttcgaggtaggcaaagtggattgggtcttgacgtatatgatgcctatacaggc
caaacgcgagatgtaaaaacgttatcgggcggggaaaaatttaatgcttcactctgcctt
gctcttggcatggcagatgtcattcaaagtttccaaggttcagtttcgattgacaccatg
tttatcgatgaaggattcggttcactagatgaggaatcgttgaacaaagcgattgatacg
cttattgacttgcaaaaatcagggcgtatgattggcgttatttcccacgttgaagaactg
aaagctgcattccctgcaattctcgaggtgaaaaaagcgaaagaaggccatagtcacacg
aagtttagcataaaatga
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