Sporosarcina sp. ANT_H38: GGGNBK_16190
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Entry
GGGNBK_16190 CDS
T10925
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
spoh Sporosarcina sp. ANT_H38
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_16190
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GGGNBK_16190
Archaeal homologous recombinant proteins
GGGNBK_16190
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_3
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
XKI13197
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Position
complement(3373381..3374538)
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AA seq
385 aa
AA seq
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MKFFHTADWHLGKLVQGVYMTEGQRFVLDQFIEAIREEKPDAVVIAGDLYDRAVPPTEAV
ALLDEMLEKITIELGTPVLAIGGNHDSPGRLHFGSGLMRANGYHITGQMTKVIEPVILMD
EYGEVHFHLVPFADPSVVKHLHDDETIVNHNDAMKKVTSAIRQQMVNGVRHVFVGHAFVT
PHGESEANTSDSERPLTIGGAEYVSAHLFEGFHYTALGHLHQAHYVLNETVRFAGSPMKY
SISEENHKKGFLIIELDAEGQVSVDKRELEPKHDMRTVIGTMEDILLHPVSEDYVFVKLL
DETPVLFPMEKVRSVYPNAMHVERKILISTTVATDEQRMEHGKHDDLALFKAFYEEMKGE
MADAETEKLFAQVLHEVMHREETGL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttccatacagcagactggcatttagggaagcttgttcaaggcgtttatatg
acagaggggcagcgttttgtacttgatcaattcattgaagcgatcagagaagagaagccg
gatgcggtcgttatcgcaggtgatttgtatgaccgagcggttccgccgacggaagccgtt
gcactacttgatgaaatgcttgaaaagattaccattgaactcgggacacccgtccttgcg
attggaggaaaccatgatagcccgggacgtctccattttggaagcgggttaatgagggca
aatggttaccatattacaggtcagatgacgaaagtaattgaaccggtgattttgatggat
gaatacggtgaagttcattttcatctcgtaccatttgctgatccttctgtagtaaaacac
ttgcatgacgatgaaacaattgtgaaccataacgatgcgatgaaaaaagtgacatcagca
attcgtcaacaaatggtgaatggtgttcggcatgtgtttgttggacatgcttttgtgacg
cctcacggagaaagtgaagctaacacaagtgattcagaacgtccgcttacaattggcggt
gcggaatatgtgtctgcccatctttttgaaggattccactatactgcacttggtcaccta
catcaggcacattatgtgttaaatgaaacagtacggtttgcaggttctccgatgaaatat
tcgatatcagaagaaaatcataaaaagggatttctgattatagaactcgatgctgaggga
caagtatctgttgataagcgggagctagagccgaagcatgatatgcgaacggtaataggg
acaatggaagacattttgttgcatccagtaagtgaggattatgtatttgtaaaattgctg
gatgagacaccggttttattccctatggaaaaagtacggtctgtctatccgaatgcaatg
catgttgagcggaaaatattaatatcaactactgttgcaacagacgaacaacgaatggaa
cacggtaaacatgatgatttagcattatttaaagcattttatgaagagatgaagggggaa
atggcagacgcggaaaccgaaaagctgtttgcacaagtgcttcatgaagttatgcacagg
gaggagacgggactttga
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