Sporosarcina sp. ANT_H38: GGGNBK_17670
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Entry
GGGNBK_17670 CDS
T10925
Symbol
uvrD
Name
(GenBank) Superfamily I DNA or RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03420
Nucleotide excision repair
spoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GGGNBK_17670 (uvrD)
03430 Mismatch repair
GGGNBK_17670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_17670 (uvrD)
Enzymes [BR:
spoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GGGNBK_17670 (uvrD)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GGGNBK_17670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GGGNBK_17670 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
nSTAND3
PcrA_UvrD_tudor
AlphaC_N
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
XKI13490
LinkDB
All DBs
Position
complement(3684312..3686468)
Genome browser
AA seq
718 aa
AA seq
DB search
MKNFFERKKKELNIDLNEVQKKAVLQTDGPLLLLACPGSGKTTTMIMRIGYLIEEKNVDP
KRIKAITFSKASARDMTERFTRFFPHSARVDFSTIHSLAFMIARTYLDKIGTTYELIEGS
GTGRQSINKAFLLKGIYKDVLKEDCTDDELSSLSTFISGIKNRLIPIEEWEELKGPVDKA
GRIARKYEQHKSRTNGHLLLDFDDMLTISEQALREDEQLSERFRNLYDYLLTDESQDTSL
VQHKIVEHLVAHHGNLCVVADDDQSIYTWRGAEPDYLLDFRRVYPDAQVLMMERNYRSSK
EIVELASTFIKRNKKRYPKDMHTKNGKVEPIYIKQLNSPKQQLEYVTYELLGEKNLNEIA
ILFRNNSSSTMFVSELHRRGIPFYMKDADDKFFSHWIVEDILNFMRLSFNTERKDIFAKI
IMKMNIFISRNMLTQFENTATTGNVFDAFIQTVEMKDSQVKKLADYKKGYAVIPDMRPER
VIQLIRNDLGYEAALKSRAEKFGYRIDSLLSILDTLEGIASQLKTMVEFASRLKELEKAV
QNAKSNTSENAVTLSTFHSAKGLEFRRVFMIDLLKGVIPSEEDEGDAAMLEEARRLFYVG
MTRAKSRLELLSFGQDEGKPKEDSRFLNEVRGLLLKPGEAKKEQKPVKITKASIALNPNG
IKDGDELAVGTAVKHRVFGQGEIIRREGDGINIQFGKVEKRLDLETVLSLRLLEKVSQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttttttgaaagaaaaaagaaagaattgaatatagatttgaatgaagtgcaa
aagaaagcagtcctacaaacggacggaccacttctacttttagcttgccctggatcaggg
aaaacgacgacgatgattatgcgcatcggttatttaattgaagaaaagaatgtagacccg
aaacggattaaggcgattaccttcagtaaggcatctgcgcgtgatatgacagagcggttt
acaaggttcttcccgcacagtgcacgtgtcgacttttccacaatccatagtttggcattt
atgattgcacgtacttatttagataagataggcacaacgtatgagctgattgaaggaagt
ggaacaggtcgtcagtctatcaataaggcctttttattgaaagggatttataaagacgta
ttgaaagaggattgcaccgatgacgaactgtcgtctctgtcgacgttcatcagtgggata
aaaaaccgtttaattcccattgaggaatgggaggagctgaaggggcctgtcgacaaggca
gggcgcatcgcaaggaaatatgaacaacataagagtcggacaaatgggcatctgcttctc
gattttgatgacatgttgacaatttctgaacaggcgcttcgtgaagacgagcaacttagt
gagcgattccgtaacctttacgactaccttctgaccgacgaaagccaagacacctccctt
gttcaacataaaattgtggagcatctcgttgcacatcatggaaatctctgtgttgttgca
gatgatgatcagtcaatttatacgtggcggggagcagagccggattatctgttagatttt
aggcgtgtctatccggatgctcaagtactgatgatggaacgcaattaccgctcgtcaaaa
gaaatcgtggagttggcttcgacgttcatcaaacggaacaaaaagcgctatccgaaagac
atgcatacaaaaaatggcaaggtagagccgatctatattaaacagctgaatagcccgaaa
caacaactagaatatgtaacgtacgaactgcttggagagaagaacttgaatgagattgct
attttgttcaggaataattcatcttcaacgatgttcgtgagtgaactgcacaggcgcggt
attccattttatatgaaggatgctgacgacaagtttttctcacattggattgtcgaagat
atcttgaactttatgcgtctcagttttaatacggaacggaaagatatatttgctaaaatt
attatgaaaatgaatattttcatctcgcgaaatatgctcacacaatttgaaaatacggca
acaacggggaatgtattcgatgcatttattcaaacggttgaaatgaaggacagtcaagtt
aaaaagttagctgactataaaaagggttatgctgtgattcctgacatgcgcccggaacgc
gtaattcagctaattcgcaacgatctaggctatgaggcagcacttaaaagtcgggctgaa
aaattcggctacagaatcgatagtctccttagcattctagatacgctggaaggaattgca
tctcaactaaagacgatggtcgaatttgcgagccgcttgaaagaacttgaaaaggcggta
caaaacgcaaaatccaatacgtctgaaaatgcggtgacgttatcgacgttccatagtgca
aaagggcttgagtttcggcgtgtgttcatgattgacttgctaaaaggggtcattccatct
gaggaagatgaaggggacgctgcaatgttggaagaagcgcgaaggctcttctacgtcggt
atgacacgtgcgaaaagtcgacttgaattgctatcattcggtcaggacgaagggaagccg
aaagaagattctaggtttctgaatgaagtacgaggactccttttgaaaccaggagaagcg
aaaaaagaacagaaaccagtaaagattaccaaagcctcgattgcacttaatcctaatggt
attaaagacggtgacgagcttgcagttggaacagcggttaaacaccgtgtattcggacag
ggtgaaatcatccggcgtgagggtgatggaattaatatccaattcggtaaagtggagaag
cggctggatcttgaaacggtgctttcacttaggctcctcgaaaaagttagccaatga
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