Sporosarcina sp. ANT_H38: GGGNBK_20830
Help
Entry
GGGNBK_20830 CDS
T10925
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spoh Sporosarcina sp. ANT_H38
Pathway
spoh03420
Nucleotide excision repair
spoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GGGNBK_20830 (pcrA)
03430 Mismatch repair
GGGNBK_20830 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoh03400
]
GGGNBK_20830 (pcrA)
Enzymes [BR:
spoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GGGNBK_20830 (pcrA)
DNA repair and recombination proteins [BR:
spoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GGGNBK_20830 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GGGNBK_20830 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
AAA_11
ResIII
NAD_binding_10
APAF1_C
Motif
Other DBs
NCBI-ProteinID:
XKI14053
LinkDB
All DBs
Position
complement(4235920..4238157)
Genome browser
AA seq
745 aa
AA seq
DB search
MNKIAEDLLIGMNPEQARAVKKTEGALLIMAGAGSGKTRVLTHRIAYLVVEKNIYPSNIL
AITFTNKAAREMRDRIDGLLGAGTGERMWVSTFHSMCVRILRRDSDRIGISKTFSILDSA
DQLSVIKSVLKTLNLDAKQYEPRSMLNAISSAKNECIDAEMYRAQINSHNPYEKTIADVY
DGYAKRLRQNQSFDFDDLIMMTLVLFERVPDVLEFYQNKFQYIHVDEYQDTNNAQYRLVN
MLAAKFKNLCVVGDSDQSIYRWRGADIGNILSFEKDYKNAEMIMLEQNYRSTQRILQAAN
DVITNNKSRYDKKLRTDNEEGDSIYVYKASDEKDESQFVVGKIIELKEQEKLKLDQFAVL
YRTNAQSRVIEEYLVKSNLDYTIVGGTKFYERKEIKDLLAYLKLISNNDDDLALARIINE
PKRSIGATSFDKMARFSIEHDRSIFDALQEVDFMGITARAANEVAKFRELIAGFTRMQEY
LSVTELVEQILDKSGYREMLQREKTIESESRLENIEEFLSVTEAFEKRAEEDTGDKSLVA
FLTDLALIADIDSLDKEENKSTEKIVLMTMHAAKGLEFPVVFIIGMEENVFPHSRSMGDN
EEMEEERRLAYVGITRAEQKLYLTSASYRTLYGRASYNSPSRFIAEISDDITEIVSKNSG
FSIGGGSKARNEAPVRSAVKKPVYNTSGGDKMGWSPGDKAVHKKWGTGMVVSVKGTGEEV
ELDIAFPNPVGIKRLLAKFAPIEKA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatagcagaagacttacttataggtatgaacccagaacaggctcgtgcagtg
aaaaaaacagaaggtgcccttcttataatggcgggtgctggctccggcaaaacacgtgtc
ctgacacatcggattgcctatctcgttgttgagaaaaacatttatccttccaatatttta
gcgattacatttacaaacaaagcggcacgtgaaatgcgtgaccgtatcgatggattgctt
ggtgcaggcacgggagaacggatgtgggtttcgacatttcactcaatgtgtgtccggatt
ttgcgccgagatagtgatcgaatcggaatttcaaaaacattttcgattctcgattcagcc
gatcaattgtcggttattaaaagcgttttgaaaacgttgaacctcgatgcaaaacagtac
gaaccacgttcaatgctgaatgctataagctcagcaaaaaatgagtgtattgatgcggaa
atgtaccgcgcgcaaatcaactctcacaacccctatgaaaaaacgattgcagacgtctat
gatggctacgcaaagcgattgcgccaaaaccaatcgttcgattttgacgatttaatcatg
atgacgcttgtcttattcgaacgcgtaccggatgtccttgaattttatcaaaacaaattc
caatacattcatgtcgatgaataccaggatacgaataacgcacagtatagacttgttaat
atgctggcggctaaatttaaaaacttatgtgttgttggagattctgaccaatctatctat
agatggcgcggtgcggacatcggcaatattctgtcctttgaaaaagactataaaaatgcc
gaaatgatcatgcttgagcaaaattatcgctcgacgcaacgaatcctacaagcagcgaat
gacgtcataacaaataacaaaagtcgctatgataaaaagctacgtacagataatgaagaa
ggcgattcgatttatgtctacaaagcgagcgacgaaaaagatgaatcgcagtttgttgtt
ggtaagatcattgagttgaaagagcaggagaaattaaagctcgatcagttcgctgtccta
tatcgcacgaacgcacagtcgcgcgttatcgaggaataccttgttaaatcgaatctcgat
tacacaattgttggcggcacgaagttctatgaacggaaagaaattaaagacttgcttgca
tatttaaaactcatctccaacaatgatgatgatcttgcacttgcgcggattatcaatgag
cctaagcgcagtataggtgctacatcatttgataaaatggcacgtttttcgattgaacat
gaccgctctattttcgatgcgttacaagaagttgactttatgggaatcacggcgagggct
gcaaacgaagttgccaagttccgggaacttattgcaggatttactcgaatgcaggaatac
ttatcggtaactgaacttgttgagcaaatacttgataaatcgggttatcgcgaaatgctt
caacgtgaaaaaacgattgaatcagagagccgtctggaaaacatcgaagagtttttatct
gtaacggaagcttttgagaaacgtgcagaagaagatacaggtgacaaatcattagtggca
ttcctgacagatcttgcgctcatcgcagacattgattcacttgataaagaagaaaataaa
tctacagagaaaatcgtccttatgacgatgcatgctgcaaaaggtcttgagtttcctgtt
gtcttcatcatcgggatggaggaaaatgttttccctcactcacgttcgatgggcgataac
gaggaaatggaagaagaaaggcgtcttgcatacgtgggtatcacgcgtgcggagcaaaaa
ctctatctaacttccgcatcctatcgcacgctttatggacgggcgagttataatagccct
tcgcgtttcattgcagaaatctcggatgacattacggaaattgtctcgaaaaattctgga
ttctccattggaggcggatccaaggcacgaaatgaagcacctgtacgatcggctgttaaa
aagcctgtatataatacgagcggcggagacaaaatgggatggagcccgggcgacaaagcg
gtccacaaaaagtggggaactggtatggttgtcagtgtgaaagggacaggcgaggaagta
gaactggatattgctttcccgaatccagttggcatcaagcgcctgcttgcgaaatttgca
ccaattgaaaaagcatga
DBGET
integrated database retrieval system
