Spongiibacter sp. IMCC21906: IMCC21906_00129
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Entry
IMCC21906_00129 CDS
T03945
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoi03021
]
IMCC21906_00129
Transcription machinery [BR:
spoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC21906_00129
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
KORA
Motif
Other DBs
NCBI-ProteinID:
AKH67823
UniProt:
A0A0F7M0N9
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Position
complement(141063..141914)
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AA seq
283 aa
AA seq
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MSSTQLQPLQQLVPGGDLSAYIQSVSSIPVLTAEREKELAEELFYQGNLESARQLVMSHL
RFVVHIAKSYNGYGLPQADLVQEGNVGLMKAVKRFDPEKGVRLVSFAVHWIKAEIHEYVL
RNWRIVKVATTKAQRKLFFNLRGAKKQLAWLNNSEVQAVAEDLGVDVAEVRRMEGRLSSV
DIGFDADADDETGPVAPVHYLEDRSNDPADLLESSDWEASNHQQLSYALSELDERSRDIL
QCRWLGENKSTLHDLADRYGVSAERIRQLEQAAMKKLRAAMEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacccaactgcagccgctacagcagcttgtgccaggtggtgacctctctgca
tatattcaatctgtaagcagtattccggttctgaccgctgagcgggaaaaagaactggcc
gaagagttgttttaccaaggcaacttagagtccgcgcgtcagctggttatgtcccatctg
cgttttgtagtgcatatcgccaaaagctataacggttatggcttgcctcaggctgatctg
gttcaagaaggtaatgtgggcctgatgaaggccgttaaacgcttcgatcccgaaaaaggc
gtgcgtttggtgtcttttgcggtgcattggattaaagccgagattcacgagtatgtgctg
cgtaactggcgcatcgtaaaagtggctaccaccaaggctcagcgtaagttgttctttaat
ctacgcggcgctaagaaacagctggcatggttgaacaatagcgaagttcaagctgttgcc
gaagacttgggtgtggatgtggctgaagtccgccgtatggaaggtcggctcagttcggtt
gatattggctttgatgccgatgcggatgatgaaaccggtcctgttgctcccgtccattat
cttgaggatcgcagtaatgaccccgctgacctgctggaatccagcgattgggaagcgagt
aaccatcagcagcttagctatgctttgagtgagttggatgagcggagccgggatattctg
caatgtcgttggctgggcgagaacaaatccaccttgcatgacttggctgatcgctatggt
gtgtctgcagagcggattcgccaattagagcaagcggcaatgaaaaaacttcgggcggca
atggaagcgtaa
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