Spongiibacter sp. IMCC21906: IMCC21906_00178
Help
Entry
IMCC21906_00178 CDS
T03945
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi00300
Lysine biosynthesis
spoi00470
D-Amino acid metabolism
spoi01100
Metabolic pathways
spoi01110
Biosynthesis of secondary metabolites
spoi01120
Microbial metabolism in diverse environments
spoi01230
Biosynthesis of amino acids
Module
spoi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IMCC21906_00178
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IMCC21906_00178
Enzymes [BR:
spoi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IMCC21906_00178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Draxin
Motif
Other DBs
NCBI-ProteinID:
AKH67872
UniProt:
A0A0F7M0L4
LinkDB
All DBs
Position
202111..202941
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFVVIDLITQRFKIKPHHIRKIADRHFGIGCDQVLLVEIPTQPDVDF
QYRIYNAEGSEVEQCGNGARCFARFVRDKRLTGKKSIKVETLAGILELEVTDNRQVRVDM
GQPILDPMRIPFQAEEEQASYSLTVHDQQWQVGAVSMGNPHVVLPVDDVDNAPVETLGPS
IESHSRFPQRVNVGFAQIVNRQTLRLRVFERGVGETLACGTGACAAVVSGIVQGQLDSKV
NVSLPGGELSIEWQGLGQPVIMTGPATTVFEGQIQL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacgctttaccaaaatgcacggactgggcaatgattttgtcgtcattgacctc
attacccagcgcttcaaaatcaagccccatcatatacgcaaaattgccgaccgccatttt
ggcattggctgcgatcaagtattactggtcgaaattccgacccagcccgacgtcgatttt
cagtaccgcatttacaatgccgaaggtagtgaagttgaacaatgcggtaacggcgcccgc
tgttttgcccgctttgttcgggacaaaaggctcaccggtaaaaaaagcatcaaggttgag
acactcgctggcattcttgagctggaagtaaccgacaatcgtcaagtacgggtggatatg
ggccaaccgattctagaccctatgcgcatcccgtttcaggcagaggaagaacaagcgagc
tatagcttgacggtacatgatcagcagtggcaagttggtgcggtctctatgggcaaccct
catgtggtgctacccgtcgacgacgttgacaacgcccccgttgaaacactcggccccagt
atcgaaagccacagccgctttccccagcgggttaatgtcggcttcgctcaaatcgtcaat
cggcaaacactacggctgcgggtgtttgaacgcggcgttggcgaaactctcgcttgtggc
actggcgcgtgtgcagccgttgtcagcggtattgtgcaaggccagctcgatagtaaagtc
aacgtcagcttacccggcggtgagctgagtattgagtggcaaggactgggacagcccgtt
atcatgaccgggcccgcaaccaccgtttttgaaggtcaaattcaactatag
DBGET
integrated database retrieval system