Spongiibacter sp. IMCC21906: IMCC21906_00294
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Entry
IMCC21906_00294 CDS
T03945
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC21906_00294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_00294
Enzymes [BR:
spoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IMCC21906_00294
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IMCC21906_00294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SPMIP11
DUF7281
MbtH
Motif
Other DBs
NCBI-ProteinID:
AKH67987
LinkDB
All DBs
Position
325212..325994
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AA seq
260 aa
AA seq
DB search
MRIISFCADSIVDAAERGFFDWIVEQDADVVCIQNLGIAEYKLRDDVYFPREYNPYFFDS
ADGKSNGVAIYTRKLPKAIMTGLGFLDFDMDGLYIQADFDDISIGSLLAPSAYDKDASEQ
SRKNQFFEQYMNHLTKVRNKRRDFIICGNWNIAHRSIDIQDVKGNHGVSGSLAEEQQWMD
RLFREQHYSDAFRLVTTDADEFSWWPKGEPGKDGWRVDYQIVSERLKPKVEFGALYKVQQ
FGSHAPLIMDYDYELPEAEF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagaattatcagcttttgtgctgacagcatagtcgatgccgctgaacgtggttttttt
gactggattgtagagcaggatgcagacgtcgtttgcatccaaaatctcggtatcgccgaa
tacaaactccgggacgacgtctacttccccagagaatacaacccgtacttctttgattct
gccgacggcaaaagcaacggtgtggcgatttacactcgcaagctgcccaaagccattatg
accggcctgggatttttagacttcgacatggacggtctttatattcaagccgattttgac
gatatcagcattggcagcctgttggcgcccagcgcctacgacaaagatgccagcgagcaa
tctcgaaaaaaccagttttttgaacaatatatgaatcacctgacaaaagtgcgcaacaaa
cgtcgggacttcatcatctgtggcaactggaatattgctcaccgcagcattgatattcaa
gacgtcaaaggcaaccacggcgtttccggtagtttggcagaagaacagcagtggatggat
aggctgttcagagagcagcactactccgatgcctttagactggtaaccaccgacgccgat
gaatttagctggtggccaaaaggtgaacccggtaaagatggctggcgggttgattatcaa
attgtctccgagcgcttaaaacccaaagtggaatttggcgcgctgtacaaagtacagcag
tttggtagccacgccccactcatcatggactacgactacgaactgcccgaagcagagttt
tag
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