Spongiibacter sp. IMCC21906: IMCC21906_00322
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Entry
IMCC21906_00322 CDS
T03945
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spoi03000
]
IMCC21906_00322
Transcription factors [BR:
spoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
IMCC21906_00322
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
IcmF-related_N
VapC50_C
Motif
Other DBs
NCBI-ProteinID:
AKH68015
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Position
complement(355658..356512)
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AA seq
284 aa
AA seq
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MRPRNVIRAIETARDSLRRSERLVADYILANQREVIHMRIVDLAQEAHVSEPTVVRFCRA
VGCDGFQNFKLSLAQHLAHSPEYEAFTFTDEDSARQYTFKVFDATMEAMKKVRDAIELDA
VEKAVELLSNARRVEFYGFGASAAVASDAQHNFFRLQISASVYSDPHMQAMSAMSLHSHD
VVVAISQSGRTRALLDVIKLAQNNGAPVIALAPSGTPVADASDVPIYIDLDRDGGNYTPL
PSRLAHMAVLDILTVGIATNKKGLREHLATIEEGLQALRLEAKD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgagacccagaaatgtcattcgcgctattgaaactgccagagactcactgcgtcgcagt
gagcgattggtggcggattatattttggccaatcagcgtgaagtgatccatatgcgcatt
gtggacttggcccaagaggcgcatgtcagtgagcccacggtggtgcggttttgccgagcg
gtgggctgcgatggttttcagaatttcaaactttctttggctcaacacctcgctcatagc
cccgagtacgaagcctttaccttcaccgatgaagacagtgctcgccagtacacctttaaa
gtgtttgacgcgactatggaggcaatgaagaaggttcgagacgccattgaattagatgcg
gtcgagaaagcggtggagctattgtccaatgcccggcgggtggaattttatggctttggt
gcctcggccgcggtggccagcgatgctcagcacaacttttttcgcctgcagatcagtgcc
agtgtttattctgacccgcatatgcaagcgatgtcggctatgtcattacacagccacgat
gtggtggtggctatctcccaatcgggccgcacccgggcattgttagatgtgatcaagctg
gcgcagaacaatggcgccccggtgatcgccttagccccaagcggcacgccagttgcggat
gccagcgatgtgccgatttatattgatctcgatagagacggcggcaactacacgccgttg
ccctcgcgcttggcccatatggcggtgttggatatcctgacggtggggattgccaccaat
aaaaaaggacttcgcgaacatttagccacgatagaggaagggctgcaggcgctgcgatta
gaagctaaggactaa
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