Spongiibacter sp. IMCC21906: IMCC21906_00492
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Entry
IMCC21906_00492 CDS
T03945
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03030
DNA replication
spoi03410
Base excision repair
spoi03420
Nucleotide excision repair
spoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC21906_00492
03410 Base excision repair
IMCC21906_00492
03420 Nucleotide excision repair
IMCC21906_00492
03440 Homologous recombination
IMCC21906_00492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoi03032
]
IMCC21906_00492
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_00492
Enzymes [BR:
spoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC21906_00492
DNA replication proteins [BR:
spoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IMCC21906_00492
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IMCC21906_00492
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC21906_00492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AKH68185
UniProt:
A0A0F7LY14
LinkDB
All DBs
Position
531306..533897
Genome browser
AA seq
863 aa
AA seq
DB search
MLRRLQKDYPDSPIAVIFDAKGKTFRDELFDQYKAQRPPMPDDLRLQIQPINDIIDAMGL
PRLVIDGVEADDVIGTLAAQASGDLPVIVSTGDKDMAQLVNGHVTLVNTMTETMMGEEGV
KEKFGLPPNLIIDYLALMGDKVDNIPGVPGVGEKTALALIQALGGIKDIYQKLDQVPELS
IRGAKSLAKKLEDNREMAELSYTLATIKCDVELELDLAALTPTEPNKEKLLALFQEMEFK
SWVEELASGEAEQGGDPVAAPASNYELVLTQEAFEAWLKKLDAAALFAFDTETTSLDYMQ
ARVVGVSFAVEPGEAAYVPFGHDYMDAPDQLSEGQVLGALKPLLENPDKAKLGQNLKYDA
NVLLNHGISLNGIAEDTMLQSYVLDSTASRHDMDSLALKYLGHSTIHFQDIAGKGAKQLT
FNQIALDQAGPYAAEDADITLKLHSELSSRLEKHSPLVSVYRDIELPLVPVLSRIERNGA
LVSREMLAKQSQELGEKIQALEAQAHDLAGGPFNLSSPKQLGEILFNKLEIPVIKKTPKG
APSTAEEVLAELAHDYPLPKVILDYRGLAKLKSTYTDKLPLLIQPTTGRIHTSYHQAVAA
TGRLSSSDPNLQNIPIRTPEGRRIRKAFIADKGNKILAADYSQIELRIMAHLSEDKGLID
AFANGEDIHRATAAEVFGVELDDVSDEQRRNAKAINFGLIYGMSAFGLGRQLHIGRNEAQ
QYIDLYFARYPGVLRYMDDTRKLAAEKGYVETLFGRRLHLPEINAKNGQRRQAAERTAIN
APMQGTAADIIKRAMIAVDAYLMDEQPKAKMIMQVHDELILEVAEEQLEAVTNKVEALMA
GAASLNVPLEVGLGVGDNWDEAH
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgactgcaaaaagattacccggatagccccattgcggtgatttttgatgcc
aagggcaaaacctttcgcgacgagctgtttgaccagtacaaggctcagcgcccgcctatg
cctgatgatctgcggctacagattcagcctatcaacgatattattgacgccatgggcttg
ccccggctggttatagatggggttgaggccgatgatgttattggcacccttgctgcccag
gcttctggtgatttaccggtgattgtgtccactggcgacaaagatatggctcagttggtg
aatggtcatgtcaccctcgttaataccatgaccgaaacaatgatgggtgaggaaggagta
aaagagaaatttggcttgccgcctaacttgatcattgattatctcgccctgatgggcgac
aaagtcgacaatattccaggtgttcccggcgtgggggaaaaaaccgcactggccttgatt
caggctttgggtggaattaaagacatttaccagaagcttgatcaggttcccgagttaagc
attcgcggcgcgaaaagcttggccaaaaagctggaagataaccgggaaatggccgaactc
tcctacacattggcgacgataaagtgcgatgttgagctggagttggatctggctgctctc
acccccaccgagcccaacaaagaaaagctgctggccttgttccaagaaatggaatttaaa
tcttgggtggaggagcttgcgtcgggtgaggctgagcaaggtggcgaccccgttgctgcg
ccagctagcaactatgagctggtgctgacccaggaggcctttgaggcttggcttaaaaag
ctggatgctgcggctttgtttgctttcgataccgaaaccaccagcttggattatatgcag
gcccgggttgtgggagtgtcctttgcggtggagccgggcgaggcagcgtatgtgcccttt
ggccacgattatatggatgcgcccgatcaattaagtgaagggcaggtgctgggggcttta
aagccactcttggaaaatcccgataaggctaagctaggtcaaaatcttaaatacgacgcg
aatgtgcttttaaatcacggcatttccttaaatggcatcgctgaagacactatgctgcaa
tcctatgtgctggactccactgccagtcggcatgatatggatagtttggcgctgaagtat
ctaggtcactcgaccatccatttccaagacatcgccggcaaaggcgctaagcagctgacg
tttaatcaaatcgcgctcgatcaggctggcccctacgctgccgaagatgccgatatcacc
ttaaagctacatagcgagctgtcatcccgcctggaaaagcattcgccactggtatcggta
taccgcgatatcgagctgccgctggtgccggtgttgtcccgcattgagcgtaatggcgcg
ctggtcagccgggaaatgctggccaagcaaagtcaggagttgggagagaaaattcaggcc
ttggaggcgcaggcccatgacttggccggcggcccttttaacttgtcctcgcccaagcag
cttggcgaaatattgtttaataagctggaaatcccggtcattaaaaaaacccccaaaggc
gcgccttctaccgcagaagaagtgctggcggagctggcccacgactaccctctgcccaaa
gtgattttggattaccggggtttggcaaagttaaagtccacctacaccgacaagttgcca
ctgctgattcagccaacgacaggccgaattcatacctcctatcatcaggccgttgctgcc
acgggccgactgtcgtcatcagaccccaatttacaaaatatccccattcgtaccccagaa
gggcggcgtattcgcaaagcttttattgctgataaaggcaataaaatactggcggcggat
tactctcaaattgaactgcggattatggcccatttgtcagaagataaaggcttgatcgac
gcatttgccaacggcgaagacattcaccgggccactgctgctgaggtatttggggtcgaa
ctggacgacgttagcgacgagcagcgccgcaatgccaaggccatcaattttggtttgata
tacggcatgtccgcttttggtttgggccgacagctgcatattggccgcaatgaagctcag
caatatatcgacctctactttgcgcgttaccccggcgtactccgttacatggatgacact
cgcaagctggcggctgagaaaggctatgtcgagacgctatttggccgtcgtctgcacttg
cccgaaattaatgccaagaatggtcagcgtcgccaagctgccgagcggactgcgattaac
gcgccaatgcaaggcaccgcggcggatattatcaagcgagcgatgattgccgtggatgcg
taccttatggatgagcagcctaaagcgaaaatgattatgcaggtgcacgatgagttgatt
ttggaagtggcagaagagcagctcgaagcagtgaccaataaagtagaggccctgatggcc
ggagcggcaagtttgaatgtgccgctggaagtgggtttaggtgtaggggataactgggat
gaggcgcattag
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