Spongiibacter sp. IMCC21906: IMCC21906_00502
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Entry
IMCC21906_00502 CDS
T03945
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_00502
Enzymes [BR:
spoi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IMCC21906_00502
DNA repair and recombination proteins [BR:
spoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IMCC21906_00502
Prokaryotic type
IMCC21906_00502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BamHI
Motif
Other DBs
NCBI-ProteinID:
AKH68195
LinkDB
All DBs
Position
complement(541923..543299)
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AA seq
458 aa
AA seq
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MSTVAVWFRHDLRCLDHRALSAACEAADSVRAVYFLCPEQLDEHVIAPIRRHYLRRALDE
LATQLATLGIELDIVNAGHFRALPQALSAYADKFQLEAVYAHKEWLVDEIARDEACQQAL
NGKLQLIDDSLINPLALSKDDGDPYKVFTPFSKRCRTYLQQQFPRCLRRPTTKGVSVIPS
QCPVFGDEKPSTDWPVTEEAVLNQLRTFCAERAEDYQEQRDFPAEQGTSTLSPALALGII
SPRQCLARLQAEAGEQIWEAKSGPGCWFNELLWREFYRHIAFHFPRVVKGKAFQPHTDKV
AWRYDQKDFDAWREGNTGYPIVDAAMRQLKETGWMHNRLRMISASFLCKDLHIDWRWGEK
HFLETLVDADFASNNGGWQWAASTGTDAAPYFRIFNPTTQGQRFDPDGRFILRYVPELNA
LSGKALHQPPAMDHYPAQIVDHAVARKISLALFQNLAD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtcgccgtttggtttcgtcacgacctgcgctgcctggaccacagggcccta
agcgcggcttgtgaagctgcagattcggttcgcgcggtttattttctctgccccgagcaa
ctcgacgagcacgtgattgcccccatccgtcgtcactatttacgcagagcactggacgaa
ctggccacccagctggctacgttgggtattgagttagatattgtcaacgctgggcatttt
cgagcactccctcaagccctcagcgcctacgccgataaattccaacttgaagcggtttac
gcccacaaagagtggctggtagatgaaatcgccagagatgaggcctgccagcaagcactg
aacggcaaattacagcttatcgatgacagcctgattaatccgctcgcacttagcaaagac
gacggcgacccctataaagtatttacaccgttttccaaacgttgccgaacgtatttgcag
cagcagttcccccgctgcttacgcagacctaccaccaaaggcgtgtcagttatacccagc
caatgcccggtatttggcgacgaaaaaccttcaacagactggccggtaacagaagaggcg
gttcttaatcagcttcgcacattctgtgccgagcgcgcagaggactaccaagaacaacga
gactttcctgccgaacaaggcacctcgacgctatctcctgcgctggccttgggtatcatc
agccccagacagtgtttagcacgactgcaggcagaggctggtgaacagatctgggaggcc
aagtctggccccggttgctggtttaatgagctgttatggcgtgagttttatcggcatatt
gcctttcattttccccgggtcgttaaaggcaaagccttccaaccccacaccgacaaggtc
gcgtggcgctacgatcaaaaagattttgatgcttggcgagaaggcaacaccggctacccc
attgtcgatgccgcgatgcgccaactgaaagaaaccggctggatgcacaatcggctacgg
atgataagcgcgtcattcctgtgtaaagatttacacatagattggcggtggggagaaaag
cattttttggaaaccctggtggacgcagattttgcctccaacaacggcggctggcagtgg
gcagcctcgacgggcaccgacgccgcgccatattttaggatctttaatcctaccacccaa
ggccagcgctttgacccagacggccgctttattctgcgctatgtgcccgagttaaatgcc
ctaagtggcaaggcactgcaccagccgccagcaatggatcactatcctgcgcagatagtt
gaccacgctgtggcgagaaaaatcagcctcgcactttttcaaaatcttgctgactaa
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