Spongiibacter sp. IMCC21906: IMCC21906_00657
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Entry
IMCC21906_00657 CDS
T03945
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMCC21906_00657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_00657
Enzymes [BR:
spoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC21906_00657
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IMCC21906_00657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
TrwB_AAD_bind
DAP3
Motif
Other DBs
NCBI-ProteinID:
AKH68350
UniProt:
A0A0F7LYH3
LinkDB
All DBs
Position
complement(704696..706963)
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AA seq
755 aa
AA seq
DB search
MPSRFIKPSDVATLFLYTAGFNFTLNFIATGMNTLVSIAIPSPLRRHFDYLWPAELTAPR
PGERVLVPFGNRRLVATVLDSLASSDVPTKQLKSVLERLDQGEPAISKDLLALARWAASY
YHHPIGECLQQILPVALRKATPPKIATTAWQAHGNTDELAPLPKQAHQQRALLKAIQQNG
QLSRRQIKDMGFSNSVLNALIKGHYLSPCAETTPAPPAPQPPLTPNPEQAAAVNTLTAAL
GRFERFLLEGVTGSGKTEVYLQAIHSVLQRGQQALVLVPEIGLTPQTLARFEQRYPGQVV
ALHSGLNDNERYRNWQAIKHGKAAIVLGTRSAVLCDFAELGLIIVDEEHDASYKQQDGWH
YSARDIAVKRAADWSCPVLLASATPSLDSLYNVKQGRYQQLVLQQRAGDAKPPSQRLIDI
RQQPLDEGLSPLLFKQIEDTLNAGNQALVFLNRRGFAPLVQCHSCGWMAECESCDARMTV
HFNRRELRCHHCDARGALPSHCPQCQNSSLTFQGPGTERLEMALKRRFADTPVIRIDRDT
TSNKGSMQTLVDRIHNGDPAVLVGTQMLAKGHHFPDVTLVAVVDIDGGLFSPDFRAGERT
GQLLLQVAGRAGRGDKPGTVLIQTHCPDHPVLQQLVHSGYAGFANTLMAERELMGLPPCS
FMAVMRCDAKQLSSAEQFLTTVSQGLQNHKQCDIIGPLPAPMARRAGRFRCSLLFQAAKR
SQLHTALNQACHVAEQQRRLGDLRWSIDVDPIEMF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtctcggtttatcaagccatcagacgtcgccacacttttcttatacactgctggc
tttaattttaccctgaattttatcgccaccggcatgaatacactggtttccattgccatt
cccagccctctgcgccgccactttgactacctgtggccagcggaactgactgcgcccaga
cccggcgaacgggtactcgtgccctttggcaaccgccgccttgttgccaccgtactcgat
tcactggccagcagcgatgttccgaccaagcaactcaaaagcgtattagagcgactggat
caaggcgaacccgccatcagcaaggatctgctcgcactggcgcgctgggcagcgagctac
tatcaccaccccataggtgagtgcctgcaacagatactgccagtcgccctgcgcaaagcc
acaccacccaaaatcgccaccaccgcctggcaggcacatggcaatacagacgaactggct
ccgttacccaagcaggctcaccagcaacgtgcgctactcaaggccattcagcaaaacggt
cagctcagtcggcgccaaattaaagacatgggttttagcaacagcgtcctcaacgcccta
atcaaaggacattatttaagcccctgtgcagaaactactccagcgccgccagcgcctcaa
ccaccactcacccccaacccagagcaagcggccgccgtaaatacacttacggcagcactg
ggccgatttgagcgtttccttttagaaggtgtaacaggcagcggcaagaccgaggtctac
ctgcaagcaattcacagcgtattgcaacgcggccaacaggcgctggtgctggtccccgaa
atcggcctgacgccccaaaccctggcccgctttgaacaacgctaccccggccaggtagtc
gcgctgcattccggcctcaatgacaacgagcgctaccgcaattggcaggcaatcaaacac
ggaaaagccgctatcgttctcggcacccgctccgcggtgctttgcgactttgccgaactc
ggattgatcattgtcgacgaagagcacgatgcctcttacaaacaacaagacggctggcat
tattcggccagagacatcgccgttaaacgcgccgcggactggtcttgcccggtgctgctg
gcgagcgccacaccaagtttggacagcctctataacgtcaagcagggccgctatcaacaa
ttggtactgcagcaacgggccggggacgccaagccgcccagccaacggctcatcgatatt
cgccaacaacccttagacgaaggcttaagtccgctgctgttcaagcaaatagaggacacc
ctcaacgccggcaatcaagcgctggtatttctcaaccgccgggggtttgcgccgctggtg
cagtgccacagttgcggctggatggccgaatgtgaatcctgcgatgcccgcatgactgtg
cattttaatcggcgggaactgcgctgccaccactgcgacgcccgaggggcactgcccagc
cactgtccccaatgccagaacagcagcctgacgtttcagggccccggcaccgagcgttta
gaaatggcgttaaaaaggcgctttgccgacacgcctgttattcgcattgaccgggacacc
acctccaacaaaggcagcatgcaaaccttggtggaccgtattcacaatggcgatcctgcg
gtattggtaggcacccaaatgctggccaaaggtcatcactttcccgatgttaccctcgtc
gccgttgtcgatatcgatggcggtctgttcagcccggactttcgggcgggagaacgcacc
gggcaattactgttacaagtcgctggccgggccgggcgaggtgacaaacctggcacggtg
ctgattcaaacccactgccccgaccatcccgtattgcaacaactggtacacagcggatat
gccggttttgccaacactttaatggccgagagggaattgatgggcttgccgccctgtagt
tttatggcggtgatgcgttgcgacgccaagcaactcagcagtgccgagcaatttctcacc
accgtgagtcaaggtcttcaaaatcacaagcaatgcgatattatcggccctctgcccgcg
ccaatggcccggcgggcggggcgctttcgttgcagcctgctctttcaggccgcaaaacgc
agtcaacttcacacggccttaaaccaagcctgccacgtcgcggaacaacagcggcgcctt
ggcgacctgcgctggtctatcgatgtcgatcccattgagatgttttaa
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