Spongiibacter sp. IMCC21906: IMCC21906_00866
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Entry
IMCC21906_00866 CDS
T03945
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC21906_00866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoi03019
]
IMCC21906_00866
Enzymes [BR:
spoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IMCC21906_00866
Messenger RNA biogenesis [BR:
spoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IMCC21906_00866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AKH68557
UniProt:
A0A0F7M2J7
LinkDB
All DBs
Position
complement(917802..919193)
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AA seq
463 aa
AA seq
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MTSSSVAGLWKKLTKKLPKSNRRTAAREPVIIPRDHHNISRRLISDSALKVMHRLNQSGY
DAYLVGGGVRDILLGGQPKDFDVATDATPEQVRGLFRNSRIIGRRFKIVHVRFGREVIEV
TTFRGNHSDTGGTVSKQHSARNESGMLLRDNIYGSVTEDAERRDLTINALYYTSKDFCVY
DYMGGLQDLNDKLIRVIGDPETRYREDPVRMMRVIRFAAKLNFDIEAATEEPIQRLAPLL
RDISPARLFDEVLKLFMAGNGLQTYALLQRYGLFQPLFPATQTMLNKQTPAAEAIIQQGL
INTDARIAEGKSVTPAFIYAVILWPLVKSLQAEIAASGVPEIPALHQASERVLHKQQQTV
AIPKRFSLPMRDIWELQFRLTKRNGKRAEQLLEHRYFRAGFDFLLLREQAEEIEPELGQW
WLAFQESRPELRDAMLKTSSSQEPRKRPRRRRRRPPNAARNPE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacatctagctccgttgccgggctgtggaaaaagctcaccaagaaactccccaaatcc
aataggcgcactgccgcaagggagcccgtgataatccccagggatcatcacaacatatcc
cgtcgacttattagcgatagcgcgctaaaagtcatgcaccggctgaaccagtctggctat
gacgcctaccttgttggcggcggcgtgagagacattttgctcggcggccaacccaaagac
ttcgacgtcgccaccgatgccacccccgagcaagtgcgcggcctgtttcgcaacagccgc
atcattggcaggcgcttcaagattgtccatgtgcgttttggcagagaagtgatagaggtc
accactttccgaggtaatcatagcgacaccggcggaacagtcagcaagcaacattctgct
cgcaacgaaagtggaatgctgctgcgagacaatatctatggttcggttactgaagacgct
gagcgcagagacctcaccattaacgccctgtactacaccagcaaagacttttgtgtgtac
gattatatgggcggcctgcaagacctgaacgataaacttatccgggttattggcgacccc
gaaactcgttaccgcgaagacccagtaagaatgatgcgggttatacgttttgcggcaaaa
ctgaattttgatattgaagccgctaccgaagaaccaattcaacgactggcaccgctgctc
agagacatctcccccgcgagattatttgacgaagtcttgaaattatttatggctgggaat
ggcctgcaaacctatgccttattacagcgctatggtttatttcaacccttgtttcctgcc
acccagaccatgttaaacaagcaaacccccgcggcagaagccattatccaacagggcttg
attaacaccgatgcgcgaattgccgaaggcaaatccgtcaccccggcttttatttacgcc
gtgatcctttggcccttggtgaaatcactgcaagctgaaatcgccgcttctggtgtgccc
gaaatccctgcactgcatcaagcctctgagcgcgttctgcacaagcaacaacaaactgtg
gcgattcccaagcggttttccctgccaatgcgcgacatttgggaactgcagttccggctc
accaaacgcaacggcaaacgcgcagaacaactactggagcaccgttactttcgcgctggt
tttgatttccttctgctaagagaacaggccgaagagattgaacccgaactcgggcaatgg
tggctggcttttcaggaaagccgtcccgaattacgcgacgctatgctcaaaaccagcagc
agccaagaaccgcgaaaacgtcctcgcagacgccgtcgcagaccacccaatgcggcccgc
aacccggaatga
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