Spongiibacter sp. IMCC21906: IMCC21906_01298
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Entry
IMCC21906_01298 CDS
T03945
Name
(GenBank) response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IMCC21906_01298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spoi02022
]
IMCC21906_01298
02035 Bacterial motility proteins [BR:
spoi02035
]
IMCC21906_01298
Two-component system [BR:
spoi02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
IMCC21906_01298
Bacterial motility proteins [BR:
spoi02035
]
Pilus system
Twitching motility proteins
IMCC21906_01298
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKH68976
LinkDB
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Position
complement(1394585..1395949)
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AA seq
454 aa
AA seq
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MNSHQQNVLIVDDEPDILELLDITISRMGLNTLTASTVAEALTHLRSQEISLCLTDIKLP
DGSGMDIVSAIQACEVPPPVAVLTAYGSMELAVESLKAGAFDFINKPVSIEQLRNLVKSA
LRLDNRPPPVEGSKNPRLLGETPAIKTLREQINKLARSQAPVYISGESGSGKEVVARLIH
ANGPRRDAPFVPVNCGAIPDELVESEFFGHAKGSFTGAYDHKEGLFEAANGGTLFLDEVA
DLPLNMQVKLLRAIQEKAVRRIGSNQEIPVDVRILSATHRDLSRAVASENFRSDLFYRIN
VIELQVPSLRSRTSDIPLLADFILEKISREWGLTAPALDQTAIKALQSYAFPGNVRELEN
IIERAATLCDGGKISELDLSLPSANGPLQTSDNASGDSHLQGASGRLEEYLAEIEKEIIS
EALENNRWNKTESAKTLGVTFRQFRYKLKKYELD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccatcaacaaaacgttttaatcgtcgacgacgaacccgatatcctcgagctt
ttagatatcaccattagtcgcatgggactaaacacgctcaccgcatctaccgttgccgaa
gcgctaacgcacttacgcagccaagagatcagtttatgtctcaccgacattaaactgcct
gacggttcaggtatggatatcgtcagtgccatacaagcgtgtgaggtgccgccaccggtc
gcagtactcaccgcttacggcagcatggaactagcagtcgaatcattaaaagccggcgcg
tttgattttataaacaaaccggtttcgatagaacaattacgtaatttagttaaatctgca
ctgcgcctggataatcgccccccccctgttgaaggcagcaaaaatccgcggttgttaggc
gaaacccccgccatcaaaacgctacgtgaacagatcaacaaactcgctcgaagccaagcg
cctgtctatatcagcggcgaatccggtagcggtaaagaagtggtcgcccggcttatccat
gctaacggtccccgtcgagacgcgccctttgtgcccgttaattgtggtgccattcccgat
gagctagtagagagcgaattctttggtcatgcaaaaggcagctttaccggcgcctacgac
cacaaagaaggcttatttgaagcggccaatggcggtaccttgttcttagatgaagttgcc
gacctcccccttaatatgcaggtaaaactgctcagagccattcaagaaaaagccgtcaga
cgcattggttcaaatcaagaaataccggtcgacgtgcgcatacttagcgccacacaccgc
gacctcagccgggccgtcgcctccgaaaatttcagaagtgacctgttttaccggattaat
gtgattgaattacaagtgccaagtttgcgcagccgcaccagtgatatccccttgctggct
gattttattcttgaaaaaatcagtcgtgaatgggggctgactgccccagcccttgatcag
acggccattaaagcactgcaatcttatgcgtttccgggaaatgtgcgagaactggaaaac
atcatagaacgggctgccaccctttgcgatggcggaaaaatttcggaattagacttatcc
ctgcctagcgctaatggccctttacagacaagcgataacgcaagtggtgactctcatctg
caaggggccagcggtcgcctggaagaatatttagctgaaatcgaaaaagaaattattagc
gaagcactggaaaacaaccgttggaacaaaaccgaatctgccaaaacactgggagtcacc
tttcggcagtttcgatataagttaaaaaaatacgagctggattaa
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