KEGG   Spongiibacter sp. IMCC21906: IMCC21906_01658
Entry
IMCC21906_01658   CDS       T03945                                 
Name
(GenBank) putative nucleic acid-binding protein, contains PIN domain
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spoi  Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:spoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spoi03016]
    IMCC21906_01658
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spoi02048]
    IMCC21906_01658
Transfer RNA biogenesis [BR:spoi03016]
 Prokaryotic type
  tRNA degradation factors
   IMCC21906_01658
Prokaryotic defense system [BR:spoi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    IMCC21906_01658
SSDB
Motif
Pfam: PIN PilJ DUF5615
Other DBs
NCBI-ProteinID: AKH69335
UniProt: A0A0F7M1P1
LinkDB
Position
complement(1783679..1784077)
AA seq 132 aa
MLKHMLDTKIAIYVIKRRPIEIMPTFGAHAGQLCLSTITLAELLHGVEKSTRPEQNRQAL
EDFVSRLEVLEYGAKAAGHYGDIRADLEREGKVIGVNDLHIAGHARSEGLVLVTNNLGEF
ERVKGLRTENWV
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctcaagcacatgctagataccaagattgctatctatgttatcaagcgccgtccgata
gagatcatgccgaccttcggcgcccacgcgggtcagctttgccttagcactatcaccctg
gcggagcttcttcatggcgtggagaaaagtaccaggccggaacaaaaccgtcaggcattg
gaggactttgtttcacggctagaggtgctggaatatggggccaaagcagcggggcattat
ggcgatattcgtgccgacctggagcgcgagggtaaggtgattggcgtcaacgatctacat
attgcaggccacgcccgaagtgagggattggttcttgtcaccaataatctcggtgaattc
gagcgagtgaaaggactccgaaccgagaactgggtttag

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