Spongiibacter sp. IMCC21906: IMCC21906_01678
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Entry
IMCC21906_01678 CDS
T03945
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spoi03009
]
IMCC21906_01678
Enzymes [BR:
spoi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IMCC21906_01678
Ribosome biogenesis [BR:
spoi03009
]
Prokaryotic type
ribosomal protein modification factors
IMCC21906_01678
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKH69354
UniProt:
A0A0F7M5D1
LinkDB
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Position
complement(1804648..1805964)
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AA seq
438 aa
AA seq
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MATPPKVGFVSLGCPKALVDSERILTQLRTEGYDLVPSYNDADVVVVNTCGFIDSAKQES
LDAIGEALKENGKVIVTGCMGDDAKIRAVHPDVLAVSGPAAYEEVVGAVHAWAPPAKNHD
PFVDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGDVLEEAKRLVD
SGVRELLVISQDTSAYGLDLKYRTGFWNGRPVKTRMLELCEALGEMGVWVRLHYVYPYPH
VDNVIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAHQEKTLSRIKAWREACPDLVIRST
FIVGFPGETEEDFQMLLDWLQEAQLDRVGCFEYSPVDGATANELEDHVPDDVKKDRWERF
MAVAQKISTARLQAKIGSQQEILIDHVDEEGAIGRSIADAPEIDGKVYLDGVTDVSPGDA
LVVNIIGADEYDLWAEPA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccccctaaagtcggttttgtcagtctgggctgccccaaagcgctggtcgat
tcagagcgcattcttacccagctacgtaccgaaggctacgacctggtacccagctataac
gacgccgacgtggttgtggtcaacacctgcggttttattgatagtgccaagcaagaatcg
ctggatgccattggcgaagccctgaaagaaaacggcaaagttattgttaccggctgtatg
ggtgacgacgctaaaattcgtgccgtgcaccccgacgtgttggccgtcagtggccccgcc
gcttacgaagaagtggttggcgccgtacacgcgtgggcaccaccggcaaaaaaccacgac
ccctttgtcgatctcgtcccccctcagggtatcaagttaacgcctcggcactatgcctat
ctcaaaatctctgaaggctgcaaccatcgctgcagtttttgcattatcccgtccatgcgt
ggcgacctggttagccgccccatcggcgatgtcctggaagaagccaaacgtttggtggat
tctggcgtccgcgaactgctggtgatctcgcaggacaccagcgcctacggcctcgattta
aaataccgcaccggcttttggaacggtcgtccagtaaaaacccggatgttggaactgtgt
gaagcgctgggcgaaatgggcgtttgggtacggctacattatgtctacccctacccccac
gtcgacaatgtaattccactgatggcagagggcaaaattctcccttatttagacatcccc
tttcagcatgccagccccaaagtgctaaaagcgatgaaacggcccgctcatcaagaaaaa
accctgagccgcatcaaagcgtggcgggaagcttgtcctgacctagtgattcgctccacc
tttattgtcggctttcccggcgagacggaagaagattttcaaatgctgctggactggcta
caagaagcccagcttgatcgggtcggctgttttgaatattcccccgttgatggtgccacc
gccaatgagctggaagaccacgtgcccgacgatgttaaaaaagaccgctgggaacgcttt
atggccgtcgcccagaaaatttccaccgcacgtttacaggcaaaaattggcagccagcaa
gaaatcctgattgatcatgtcgatgaagaaggcgccattggccgcagtattgccgatgcc
ccagaaattgacggcaaggtctacctcgatggcgtaaccgacgtgagccccggtgatgcc
ttggtggtgaatatcatcggtgccgatgaatacgacctttgggccgagccggcgtga
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