Spongiibacter sp. IMCC21906: IMCC21906_01887
Help
Entry
IMCC21906_01887 CDS
T03945
Name
(GenBank) putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spoi01011
]
IMCC21906_01887
Enzymes [BR:
spoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
IMCC21906_01887
Peptidoglycan biosynthesis and degradation proteins [BR:
spoi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
IMCC21906_01887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
NMT1
Lig_chan-Glu_bd
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AKH69561
UniProt:
A0A0F7M376
LinkDB
All DBs
Position
complement(2020359..2021810)
Genome browser
AA seq
483 aa
AA seq
DB search
MRPRPNILKILLIAIPLTVVAVVFSYWDDSDNRLQNIREAGVIRVLTRNAATTFYENQGT
PAGFEYQLAKGFADHIGVKLKMIPVVGLEQIFYKLEQGDADFAAAGLTITEQRHKRMVFG
PSYMKIKQLFIYNRRLTQTMNSIESLIGKRIGVMANSSHAELLSALQQNYPKLEWKESRD
LETFDLLEQLADGQIDATVVDSNEFYANRAFYPDFRIALSAGKPVPLAWAMFRDPANEPL
RQEMEVYFKTIQENGKLARLIDRYFSFSERQSFLSTHTFMLRMEDRLPEVKGMIEQVAIE
YDMDWRFLAAISYQESHWEATAKSPTGVRGMMMLTRATAEELGVEDRLDPMESLRGGARY
FKKLLARIPSGVEQPDRGWFALAAYNIGLGHLEDARVLTEKNGGNPDLWKDVRENLPLLR
QAKWYKTTKYGFARGDEPVRYVQNIRHYYSLLTWDELNRYRIPPPKIVSDYLPEALNRSF
LAF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgcggccacgtcccaacatactaaaaatactgctgatcgcgattcccctgaccgtcgtc
gccgtggtgtttagctattgggatgacagtgacaaccgccttcaaaacatccgcgaagcc
ggggttatccgggtgcttacccgcaacgccgccaccaccttttatgaaaaccaaggcacc
ccagcgggttttgaataccagcttgccaagggttttgccgatcatattggcgttaaactg
aagatgataccggtggtgggactggaacaaattttttataagttagaacaaggcgacgcc
gattttgccgccgcgggcctgaccattaccgaacaacgccacaaaagaatggtgtttggc
cccagctatatgaagatcaaacaacttttcatttacaaccgccgcctgactcaaaccatg
aatagcatagagtcactgatcggcaaacgtatcggggttatggccaacagctcccatgcg
gaactcctgagcgcactacaacagaactaccccaaactagaatggaaagaaagtcgggac
ctggaaaccttcgacttactagaacaactcgccgacgggcaaattgacgccaccgtggtt
gactccaatgaattttatgccaaccgcgccttttatccggattttcgcattgccttgagc
gccggcaaacccgtgccactggcttgggctatgtttcgcgacccagccaacgagcctctg
cggcaagaaatggaagtgtattttaagacaatacaagaaaacggcaaattggcgcgatta
attgatcgttactttagttttagtgaacggcaatcttttttgagcacccacacctttatg
ctgcgaatggaagaccggcttcccgaagtaaagggcatgatcgagcaggttgccattgaa
tacgatatggactggcgctttctggcggcaatcagctatcaagaatcccactgggaagcc
acggcaaaatcccccactggagttcggggcatgatgatgctgacccgcgctaccgctgaa
gaactcggcgtagaagatcgtcttgacccgatggagagcttacgaggtggtgcgcgatac
tttaaaaagctgctagctcgcattcccagcggggttgagcaacccgaccgcggctggttt
gctctagcagcctacaacattggcttggggcacctggaagacgctagagtcttaaccgaa
aaaaatggcggcaaccccgacttatggaaagacgtcagagaaaacttgcccctattgcgc
caggctaaatggtataaaacgaccaaatacggttttgcccgtggcgatgagccagtgcgc
tatgtacaaaacatccgccactattactctttgctcacctgggacgagctgaatcgctat
cgcatcccaccacccaaaattgtctctgattatttaccggaggccttgaatcgtagcttt
ctggccttttaa
DBGET
integrated database retrieval system
